Query= MSMg01no313_e03.b1 MSMg01no313_e03.b1 CHROMAT_FILE:
MSMg01no313_e03.b1 PHD_FILE: MSMg01no313_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:44 2005
(405 letters)
>mm_chr14_21522361_21523165
Length = 805
Score = 677 bits (350), Expect = 0.0
Identities = 384/400 (96%), Gaps = 9/400 (2%)
Strand = Plus / Plus
Query: 5 gaattccgcgacgaggcgtgcaggaaagagatccaggacttcttcgattgttcttccagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccgcgacgaggcgtgcaggaaagagatccaggacttcttcgattgttcttccagg 264
Query: 65 gctcaggtgatgtctggcccccagcgtgccttcttgggaaaagaaaggggaatacaaaga 124
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctcaggtgatgtctggctcctagcgtgccttcttgggaaaagaaaggggaatacaaaga 324
Query: 125 aatggttcaagccgggcgtggtggcgcacgcctttaatcccagcacttgggaggcagagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatggttcaagccgggcgtggtggcgcacgcctttaatcccagcacttgggaggcagagg 384
Query: 185 caggtggatttctgagttcgaggccagcctggtctacaaagtgagtgccaggacagccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggtggatttctgagttcgaggccagcctggtctacaaagtgagtgccaggacagccag 444
Query: 245 ggctacacagagaaaccctgtctcaaaaaa--aaaaaaaaaaaaaaaaaaaccaaacaca 302
|||||||||||||||||||||||| ||||| |||||||||||| |||||| ||
Sbjct: 445 ggctacacagagaaaccctgtctcgaaaaaccaaaaaaaaaaaa-------ccaaacgca 497
Query: 303 aagaaatggttcacaccgccctgtgttaaattatgtacagagtctcccattcatctgttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aagaaatggttcacaccgccctgtgttaaattatgtacagagtctcccattcatctgtga 557
Query: 363 ttggctcaccctcaccaaagtgagaaaaagctaagttttg 402
|||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctggctcaccctcaccaaagtgagaaaaagctaagttttg 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_e03.g1 MSMg01no313_e03.g1 CHROMAT_FILE:
MSMg01no313_e03.g1 PHD_FILE: MSMg01no313_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:45 2005
(388 letters)
>mm_chr14_21685659_21686446
Length = 788
Score = 646 bits (334), Expect = 0.0
Identities = 371/392 (94%), Gaps = 15/392 (3%)
Strand = Plus / Minus
Query: 1 tcttctgtttccgggatgtcttgggcgaatggttctgctctgctctgctctgc------- 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tcttctgtttccgggatgtcttgggcgaatggttctgctctgctctgctctgctctgctc 611
Query: 54 -------c-ccgctctgctctgctctgctctgcattctaacgtggacacttaggaaacag 105
| | |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 610 tgctctgctctgctctgctctgctctgctctgcattctaacatggacacttaggaaacag 551
Query: 106 gctctttagaagaatttagctctctaacagtgcagttttggatgtagggagaagggtgga 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gctctttagaagaatttagctctctaacagtgcagttttggatgtagggagaagggtgga 491
Query: 166 tccttctaagagtgctaagattttaggtacaagggtcatcttgtctctgttctcagagtt 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tccttctaagagtgctaagattttaggtacaagggtcatcttgtctctgttctcagagtt 431
Query: 226 aagactgtgggcaagatgggaaactccagtggggatgactgagtctagatcttcatagct 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aagactgtgggcaagatgggaaactccagtggggatgactgagtctagatcttcatagct 371
Query: 286 ttcatggtctgggataagatcacagcttgttgaaatacccttttttaataaaatagcaac 345
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 370 ttcatggtctgggataagatcacagcttgttgaaatacccaattaaaataaaatagcaac 311
Query: 346 tagaagttaaatcagagacacagacagcaacc 377
||||||||||||||||||||||||||||||||
Sbjct: 310 tagaagttaaatcagagacacagacagcaacc 279
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
