Query= MSMg01no313_p16.b1 MSMg01no313_p16.b1 CHROMAT_FILE:
MSMg01no313_p16.b1 PHD_FILE: MSMg01no313_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:18 2005
(428 letters)
>mm_chr14_90688043_90688870
Length = 828
Score = 739 bits (382), Expect = 0.0
Identities = 397/406 (97%), Gaps = 8/406 (1%)
Strand = Plus / Minus
Query: 18 ggaattcattggtggattagcaccttatggtctaaatatctaggaccaattatattgcaa 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggaattcattggtggattagcaccttatggtctaaatatctaggaccaattatattgcaa 560
Query: 78 tattactaccagttagagaccacacttccaaatcataggaatttcacagacaataatgaa 137
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tattactaccagttagagagcacacttccaaatcataggaatttcacagacaataatgaa 500
Query: 138 ccctaggcctctatggtagaattcatgtattcattttttgccaaaaatatacatttgctt 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ccctaggcctctatggtagaattcatgtattcattttttgccaaaaatatacatttgctt 440
Query: 198 ttcaaactaatttttactgaacttcaatagttaatataagtggacaagaggatgacatac 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttcaaactaatttttactgaacttcaatagttaatataagtggacaagaggatgacatac 380
Query: 258 cttgaagatagattcagataatgtatgttaaagaccgaaacttgttcttaatttataata 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cttgaagatagattcagataatgtatgttaaagaccgaaacttgttcttaatttataata 320
Query: 318 cttttgtagatctaatcatggaacatagtgagaaagttattgattattgtttttt----a 373
||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 319 cttttgtagatctaatcatggaacatagtgagaaagttattgattattg----ttggaga 264
Query: 374 attagaacttacacaattatattatagtttaaaattgataaatgat 419
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 attagaacttacacaattatattatagtttaaaattgataaatgat 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_p16.g1 MSMg01no313_p16.g1 CHROMAT_FILE:
MSMg01no313_p16.g1 PHD_FILE: MSMg01no313_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:18 2005
(376 letters)
>mm_chr14_90604073_90604848
Length = 776
Score = 717 bits (371), Expect = 0.0
Identities = 374/375 (99%)
Strand = Plus / Plus
Query: 1 cttgtccatgacttataaggatttaattaatatagccattatgaagttgaggacgggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 cttgtccatgacttataaggatttaattaatatagccattatgaagttgaggatgggagt 260
Query: 61 tatatcccataataaggggcatctaaaataattaatcttatagcatttgatggcagaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatatcccataataaggggcatctaaaataattaatcttatagcatttgatggcagaata 320
Query: 121 ataattaacagaatcaagaaaatgaaaagaattaaaaagatggggggaactttgatcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataattaacagaatcaagaaaatgaaaagaattaaaaagatggggggaactttgatcaac 380
Query: 181 tagtgctatgctgtttggtatggtgaaaaaattgaatacaccttaatgcagtaaaacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtgctatgctgtttggtatggtgaaaaaattgaatacaccttaatgcagtaaaacaac 440
Query: 241 aataaaacataataatatacataatatactgtacacttttgaattttagaatagataatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aataaaacataataatatacataatatactgtacacttttgaattttagaatagataatt 500
Query: 301 tttgaaaatgtttaccagtccctttacccaagctcaggaattgttaagaaaaagagatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgaaaatgtttaccagtccctttacccaagctcaggaattgttaagaaaaagagatag 560
Query: 361 agcaatgttgtaaga 375
|||||||||||||||
Sbjct: 561 agcaatgttgtaaga 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
