CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGAATCCGCGG
AATTCATGCTATTGCCCCCCAGAACAGGCCAAAGTCCCATTAGTGTGGCA
AATGATAATTGTGCAAAAGATGCCAGTGAAAGCAAAGAAACTAATAGAGC
ATTTTTTATATAAACTGATCCACAGCAAACAAACCCTGGCTCAGAAATGT
GCATAAGTTAGAAAGGTTAAGAAAGGCTTGAAGATTTCTTGAATCCATGT
TTATTCAGCATTTCTTCAGATTTCGGTCTGAGATTCTTGTCCCTGTGCTT
GGTGCTCTGTTGTTTTCCTTGGGTTGCCATGTTGAGACTTGATATGATGT
TTTTTGTTTTATTTTACTGTCTCTTTTTAAAATTTTGTCCTTTTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTTAAANGCAAATAAAGAGTGGATCTGGAGTG
GAGTGAGGTGGGGAGGAATGAGAAGAGAGGTNNNNNNNNNNNNNNNNNNN
NNNNNNTTTTTTTTATTNNGGTTTTTGGTTTTGTTTTTTNTTTTGGTATA
TTGGAGTTTTAGATAGTTTAATGAAAATTTTATAATATTTTTTTTTTTTT
AAATATAGTTTTAGTTTTTTTTAAATATTAAGTGTATTATGACTTAGTTG
TTATGTTTTATTGATTTAGGTAGNGTGGTGTTTTTTTGGTT

CCCGGGGGGAGGTTNNCTCCCTCATAAAACCACATAATCCCCTAAAGAAG
AAAGAGGAGGTTGGAGAAGCCGGTTTTCAGAAGAGAGNGANNNNNGGGGT
TCCAAAAGGGAGGGNNGGNGGGGAGGGGGGGGGAGGGAGGAGGGGTTTTT
TTCCGAAAAGAGGGGGAGGAGAAGAGGGGGGTAGGGGGGGGGGGAGGGAG
GGAGAAAAGAGAGGGAAAAAGAGAGGAGGATAGGATGGAGGGGGGAAGGA
GGGAGAGAAGAGGGAGGGAAGGGGATGTGGGGGGGGGGAGGGTGGGGGAA
TAAAAAAAAGGGAGGGGAAGAAAGGGGGGAGGGAGAGGGGGATTTTTTTT
TGGAGGAGGGAAAAAGGGGGGAATAGGGGAGGGGAGGGGGTTTTTTTTGT
GGGAGACCACGCGCAGGGGGGAGGGGGAGGAGTATGAGGAGGGGGGGGGA
TGTATACCCACCCAGGGAGAAAAAAAAAAAAAATGGTGGGGGGGGGGGGG
GGGGGAGAGAAGAAGAGAGGAGGAGGGGGGGGAGGGAGGGGAGGGGGGAG
AGTACGGGGGGGGAGAGGGGGGGGGGAGAAAGAGAAAGGGGGGGGGAGGA
GAGGGTGAAGGGATGGGAGGGGAAGGAGTAGGGGGGGAGGATAAGAGAGG
AAGGGGGGGAGGGAGAAGAGAGAGGAGAAAGTAGAAGAGAAAGGGGGAGA
GGAGAAAAAAGAGAGGGAAGGGGGGGGGAAGGGAGGGGGGAGGAAGAAGG
AGGAAGAGAAAACATATAGTAGAGAGGGGAGGAGAGGGGAGGGGAGAGAG
GAAGAGGAGAAGGGAGAGGGGGAGGGGAGGGAGGGCGGATGAACAGAAGA
GGAATTGGGGGAAGAGGAGAGAAAGGNGAGGAGGAGAAGAGAAAGGAGGC
GGGGAGAGGTAAGAGGGGAACAGTGAAAT

Query= MSMg01no315_m08.b1 MSMg01no315_m08.b1 CHROMAT_FILE:
MSMg01no315_m08.b1 PHD_FILE: MSMg01no315_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:21 2005
         (491 letters)



>mm_chr14_93175761_93176650
          Length = 890

 Score =  837 bits (433), Expect = 0.0
 Identities = 467/482 (96%), Gaps = 7/482 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggaattcatgctattgccccccagaacaggccaaagtcccattagtgtggcaaatgataa 65
           |||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ggaattcatgctacagcagcccagaacaggccaaagtcccattagtgtggcaaatgataa 489

                                                                       
Query: 66  ttgtgcaaaagatgccagtgaaagcaaagaaactaatagagcattttttatataaactga 125
           ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 488 ttgtgcaaaagatgccagtgaaagcaaagaaactaatagagca-tttctatataaactga 430

                                                                       
Query: 126 tccacagcaaacaaaccctggctcagaaatgtgcataagttagaaaggttaagaaaggct 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tccacagcaaacaaaccctggctcagaaatgtgcataagttagaaaggttaagaaaggct 370

                                                                       
Query: 186 tgaagatttcttgaatccatgtttattcagcatttcttcagatttcggtctgagattctt 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgaagatttcttgaatccatgtttattcagcatttcttcagatttcggtctgagattctt 310

                                                                       
Query: 246 gtccctgtgcttggtgctctgttgttttccttgggttgccatgttgagacttgatatgat 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtccctgtgcttggtgctctgttgttttccttgggttgccatgttgagacttgatatgat 250

                                                                       
Query: 306 gttttttgttttattttactgtctctttttaaaattttgtccttttctctctctctctct 365
           |||||||||||||||||||||||||||||||||||||||||||      |||||||||||
Sbjct: 249 gttttttgttttattttactgtctctttttaaaattttgtcct------tctctctctct 196

                                                                       
Query: 366 ctctctctctctctctctctctctctctctctctctctctctctctctctctctctctct 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ctctctctctctctctctctctctctctctctctctctctctctctctctctctctctct 136

                                                                       
Query: 426 cttaaangcaaataaagagtggatctggagtggagtgaggtggggaggaatgagaagaga 485
           |||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cttagaggcaaatagagagtggatctggagtggagtgaggtggggaggaatgagaagaga 76

             
Query: 486 gg 487
           ||
Sbjct: 75  gg 74


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 122
Number of extensions: 48
Number of successful extensions: 48
Number of sequences better than 10.0: 1
Number of HSP's gapped: 39
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 890
Length adjustment: 10
Effective length of query: 481
Effective length of database: 880
Effective search space:   423280
Effective search space used:   423280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)