CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGTGTTCACGCTCTTCATAATATTTGGCAAAGATTTTAACCATTAT
GCCCTATCTCTTTTCTTGTCTCAGGTACAATTAAGCAATATATTTTTAAA
AGGAGTACTTAATATAGTATCGAGGGTGTTACATATTAATTAAACTACTT
AAGTCTTAGTTAGGGTTTTATTTCTGTGTAAATGGGATGTAAAATAATGT
ACAAAACAAAATATAGTATAGCTAGAGTGACTTCTCTTTGAAAATCATGA
CCAGTGTGGTGGTTTGAATAAGAACAATCCCCATGGGTTCATTTATCTGA
ATACTTAGTCACAGGAGATTGGACATCCTATATAGAATTAGAAGAGTCAG
ATCATGAGGCCTTGTTAAAGAAAATGTTTCATGAGGGAAGGCATACTTTG
AAGTTTCAGAAGCTAATCCAAATCTTTCTCTCTGCCTACTGATCATGATA
TATGCCTTAGCTATTTCTCCATTGCCTACATGCTCCCTGCTATGATGGTA
ATGCTCTGACCATCTAAATCTATAAGCAAACTCCTAAAAAAATGTTTTCA
TTTATAAAACTATCCATGGCCATAGTCTCTTCACAGTAATAGGACAGTGA
CTAAGACTGTTGGTGCCAGGGACTAGGGTATTTCTGTGAGAGGTCTGACT
GTTGCAATAAGGTCAGCAACCACTAGGTGAGGN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTCGCCCTATGTGAGACAGATGT
CAAATACCCGTTCTACCCAAAGCTGGATTATGCCCCAAGATGGCAAAGAT
TTAGCAGCTGCCGTATTAGAAGCTGTTTCTCAATTACAGTAGCTAACATG
GCAGAGAAAAGAAGCTGTAATTATGGAAAATCATAATAGGTCTGAAGCTG
CTAGTATCATGAAATATCAATTGTTAGGTGAAGGTCAATTTGATGACTTA
AGACATAAGATGTAATTTTACAACGTTATTATACAATGTACTTTAGGAGA
CTTAAGAGTCTGAGATAAAATGAAGGCACAAAGAAAAAGGACTATGTCAT
CTACCAAGATTATGCACAGTACCAGAAAAGCTTGTAGTGAATTATTACAT
AGATTAATGTCTACTATAAACAGAGCAATACTAGATACAATTAGGAGACA
GATGTTAATTGAAGTTTTAGCTTTAGAAAATGCAACTGCAGAGTATAAAT
AGTTCCTTAAAAGCTCAGTCAGCACCCATAGGTGCACAGATTAGAGCTGC
CACTGATACTGACCCTAATTACTATGTAATTGGATAAGCAATAGCCTTCA
ATATCTAAATGTCTGGTGTTTCATCTGTGGGAGACAAGGTCTTTTGAAAA
GGGATTTAGGGGAGGTGGTCTTAAGAGACTTTCTC

Query= MSMg01no316_a13.b1 MSMg01no316_a13.b1 CHROMAT_FILE:
MSMg01no316_a13.b1 PHD_FILE: MSMg01no316_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:41 2005
         (689 letters)



>mm_chr14_90115573_90116661
          Length = 1089

 Score =  882 bits (456), Expect = 0.0
 Identities = 459/460 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagtgttcacgctcttcataatatttggcaaagattttaaccattatgccctatc 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gaattcagtgttcaagctcttcataatatttggcaaagattttaaccattatgccctatc 401

                                                                       
Query: 65  tcttttcttgtctcaggtacaattaagcaatatatttttaaaaggagtacttaatatagt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcttttcttgtctcaggtacaattaagcaatatatttttaaaaggagtacttaatatagt 341

                                                                       
Query: 125 atcgagggtgttacatattaattaaactacttaagtcttagttagggttttatttctgtg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atcgagggtgttacatattaattaaactacttaagtcttagttagggttttatttctgtg 281

                                                                       
Query: 185 taaatgggatgtaaaataatgtacaaaacaaaatatagtatagctagagtgacttctctt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 taaatgggatgtaaaataatgtacaaaacaaaatatagtatagctagagtgacttctctt 221

                                                                       
Query: 245 tgaaaatcatgaccagtgtggtggtttgaataagaacaatccccatgggttcatttatct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tgaaaatcatgaccagtgtggtggtttgaataagaacaatccccatgggttcatttatct 161

                                                                       
Query: 305 gaatacttagtcacaggagattggacatcctatatagaattagaagagtcagatcatgag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gaatacttagtcacaggagattggacatcctatatagaattagaagagtcagatcatgag 101

                                                                       
Query: 365 gccttgttaaagaaaatgtttcatgagggaaggcatactttgaagtttcagaagctaatc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gccttgttaaagaaaatgtttcatgagggaaggcatactttgaagtttcagaagctaatc 41

                                                   
Query: 425 caaatctttctctctgcctactgatcatgatatatgcctt 464
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 40  caaatctttctctctgcctactgatcatgatatatgcctt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space:   732641
Effective search space used:   732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)