Query= MSMg01no316_i06.b1 MSMg01no316_i06.b1 CHROMAT_FILE:
MSMg01no316_i06.b1 PHD_FILE: MSMg01no316_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:17 2005
(659 letters)
>mm_chr14_117413758_117414820
Length = 1063
Score = 1147 bits (593), Expect = 0.0
Identities = 641/659 (97%), Gaps = 4/659 (0%)
Strand = Plus / Minus
Query: 5 gaattctcttacactgtccgatctcagccattacatgagataaatacaaagcaaggctcg 64
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gaattctcttacacagtcagatctcagccattacatgagataaatacaaagcaaggctcg 804
Query: 65 tctttattttctaagatatcttgttttggggaagccctttaaagccatagaaggtgtggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tctttattttctaagatatcttgttttggggaagccctttaaagccatagaaggtgtggc 744
Query: 125 catagttaataaagaggtacacatagtgtaatggtttctgagaaaatcttaatttctaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 catagttaataaagaggtacacatagtgtaatggtttctgagaaaatcttaatttctaaa 684
Query: 185 tt----aaagtccaccttaaatggccctactaagtagattttggattcattcctctggta 240
|| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttaaacaaagtccatcttaaatcgccctactaagtagattttggattcattcctctggta 624
Query: 241 agactccaatgaatgtttcctttctttggagagttatgctgtagattacaaaacccgttt 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agactacaatgaatgtttcctttctttggagagttatgctgtagattacaaaacccgttt 564
Query: 301 gcagacttagtcatgaggggatgtataaatgccatctcaaaattaggatgcttgttctgt 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 563 gcagacttagtcatgaggggatgtataaatgccatctcaaaattagaatgcttgttctgt 504
Query: 361 ttcttccttggcgacacggtggcacccagttttacttggcaaacagaacaggttcagtcc 420
||||||||||| || | |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 503 ttcttccttggtgaaatggtggcacccagttttacttggcagacagaacaggttcagtcc 444
Query: 421 atgtgataactgtaagcatagcaaggtcacgggccaatataaaaacagtacaacagcagc 480
||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 443 atgtgataattgtaagcataccaaggtcacgggccaatatgaaaacagtacaacagcagc 384
Query: 481 aatgacatcaacagcagtgtctcaccctaggggcaaatgctaactttttaatagagaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aatgacatcaacagcagtgtctcaccctaggggcaaatgctaactttttaatagagaatg 324
Query: 541 ctaactcctccacacgtgtctctacactggacagtctatacctgaagaacctgtcttgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctaactcctccacacgtgtctctacactggacagtctatacctgaagaacctgtcttgct 264
Query: 601 ttgaattaggaggtaacaatcatgaaccccagggagactaaagtgcttgggcaatgtca 659
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttgaatttggaggtaacaatcatgaaccccagggagactaaagtgcttgggcaatgtca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1063
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1053
Effective search space: 683397
Effective search space used: 683397
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_i06.g1 MSMg01no316_i06.g1 CHROMAT_FILE:
MSMg01no316_i06.g1 PHD_FILE: MSMg01no316_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:17 2005
(476 letters)
>mm_chr14_117260968_117261843
Length = 876
Score = 826 bits (427), Expect = 0.0
Identities = 463/483 (95%), Gaps = 15/483 (3%)
Strand = Plus / Plus
Query: 1 tcaaatttgagtcttcttccttttcgaagtggggatatatcttatctttgatctcacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaatttgagtcttcttccttttcgaagtggggatatatcttatctttgatctcacatt 260
Query: 61 ctgagattctttcaaataaaatcggagaaagtatgtaacttttacaatttgatttgcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgagattctttcaaataaaatcggagaaagtatgtaacttttacaatttgatttgcctt 320
Query: 121 caaatagtttcacagttacttttattacaattaaaatagagattcaagtcatgtgttaaa 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgaatagtttcacagttacttttattacaattaaaatagagattcaagtcatgtgttaaa 380
Query: 181 acttactttgtaactcaattgaggagcaaatttttaaagttaaaaaagaactagttctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttactttgtaactcaattgaggagcaaatttttaaagttaaaaaagaactagttctct 440
Query: 241 tgaagaaaaaaatgtttatatttattttaaatatgttgttaacatgctgtaaatggttat 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 tgaagaaaaaaatgtttatatttatttttaatatgttgttaacatgctgtaaatggttat 500
Query: 301 cttagcattctaaaggtaagttcttgaataattttcttatt----ccccccccc---aat 353
|||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 501 cttagcattctaaaggtaagttctcaaataattttcttatttgaac--------tttaat 552
Query: 354 ttgcaaactattgtgtccttttgcatacttggttgcaaatttgcataaacagcataatta 413
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 553 ttgcaaactattgtgtccttttgcatacttggttgcaaatttgcataaacagtataatta 612
Query: 414 caattatctgctttccccaaaagattagaaagggaaaactactaattaatctcatttaca 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 caattatctgctttccccaaaagattagaaagggaaaactactaattaatctcatttaca 672
Query: 474 tgt 476
|||
Sbjct: 673 tgt 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
