CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAACAAACACCGTGTTTCTTAGCACCAGATTCAAATTCATGACTT
TCTCTTCAGTATTACTTCATTTATAGCTAATGCTTTCATTGCGAAGCTCT
TCTCTTAACTGTTTGTTTCGTGTTTGCTTTGGGCAGCATCCAATTTATAC
ACTTTACCTCATTTACTTCAATTCTTTCTTTCATATAAAAGTAATTTGTT
TCACTTGAACCACAGTTGTGTACATTACCTACCAGTTCACATTTCTATAG
TTTTGAACTGATATCATAACCCAAAAATCTAGTGGCTTAGAACAACAAAT
ATTATCTAAATTTTCATGATTGATAAATAATTTTTTTCTCAAATATTTTT
ACAGTAAAATGAGGTACTGGCAAGAATCCTTACTTAAAAATTTTACTATA
TGATGGTACAAAGACTGCGAATTTTGAGTACTGGTAGCCTTGTATCCACT
ATTTTATAAAGCTGTATGTTTTCCTTTTTATTTTTATTAAAATTTACCCT
TGGATAATTTCAGACATGTGATTTTTGACTTGTATTTTCAACTAGCACTT
ACTATTTTTTTTCTAATTGACATGAGTAGTATTTTACTTTATTTCAAGGA
CTATTCATCAAGCTATTTTAATTTATATGCACATGTATCTTTCAATGTTA
TTGTATGTTCATAATTCCTAACTTCGTTACAGCCCAN

CCTGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAATAAGTGATGTATTTATA
GAGCATCACCAACTCCTCTGTCTGCTCCCATATCACTCTCAATTCTGTCT
CAAATTCATAAACTTACTTCAAAATTATTATTTCAAATGTACATATAAAT
AAGTATATAGATGTACATTATAACTATATGGACTCAAATGCACTGTGCTG
AGTTCATTTAGTGATATTCTTATACATAGATATTTAGGGCTGACCACTTT
GTCTTGGACAACTAATGAGAAAACTTGTCCTTCCAGAACCAGTATTTCCT
CTCAACTGACACTAACTGCTTGTAGCTTTTTCTGTAGAGCTGAGGGTCTG
CGAGGGCTTCTCATTCACATTTGCATGTCAGTCCATGCTGCTGTTGCTCA
AGTGTTTCAAAGAAAACTGCATTGTTGAGATTTTATGGGTGCAGCTTACC
TGCATTCTCTTTTTCCCATAATGTTCTCTGAGTCTTTTTATAGAGGTTAC
CAATTGGACTTAAGAACTTCTCAGGGGCGTCCAAGAAATTTTAAAAACTA
TAGAAACTAGTTCTCCTGTTCATGAACAATATAAGCTAATACTCCTGTCC
TTGAACAATATAAGCTAGTTCTACTGTCCTTGAACAATATAAGCTAATAC
TCCTGTCCTTGAATGATATAAGCTAGTTCTACTGTCCTTGAN

Query= MSMg01no317_b07.b1 MSMg01no317_b07.b1 CHROMAT_FILE:
MSMg01no317_b07.b1 PHD_FILE: MSMg01no317_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:01 2005
         (690 letters)



>mm_chr14_109051991_109053080
          Length = 1090

 Score = 1241 bits (642), Expect = 0.0
 Identities = 675/686 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaacaaacaccgtgtttcttagcaccagattcaaattcatgactttctcttcag 64
           |||||||||| ||||  ||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 205 gaattcaaactaacagtgtgtttcttagcaccagagacaaattcatgactttctcttcag 264

                                                                       
Query: 65  tattacttcatttatagctaatgctttcattgcgaagctcttctcttaactgtttgtttc 124
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattacttcatttatagctaatgctttcattgcgaagctcttctcttaactgtttgtttc 324

                                                                       
Query: 125 gtgtttgctttgggcagcatccaatttatacactttacctcatttacttcaattctttct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgtttgctttgggcagcatccaatttatacactttacctcatttacttcaattctttct 384

                                                                       
Query: 185 ttcatataaaagtaatttgtttcacttgaaccacagttgtgtacattacctaccagttca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 385 ttcatataaaagtaatttgtttcacttgaaccacagttgtgtacattacctaccagttcg 444

                                                                       
Query: 245 catttctatagttttgaactgatatcataacccaaaaatctagtggcttagaacaacaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catttctatagttttgaactgatatcataacccaaaaatctagtggcttagaacaacaaa 504

                                                                       
Query: 305 tattatctaaattttcatgattgataaataatttttttctcaaatatttttacagtaaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tattatctaaattttcatgattgataaataatttttttctcaaatatttttacagtaaaa 564

                                                                       
Query: 365 tgaggtactggcaagaatccttacttaaaaattttactatatgatggtacaaagactgcg 424
           ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 565 tgaggtactgggaagaatccttacttaaaaatcttactatatgatggtacaaagactgcg 624

                                                                       
Query: 425 aattttgagtactggtagccttgtatccactattttataaagctgtatgttttccttttt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aattttgagtactggtagccttgtatccactattttataaagctgtatgttttccttttt 684

                                                                       
Query: 485 atttttattaaaatttacccttggataatttcagacatgtgatttttgacttgtattttc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atttttattaaaatttacccttggataatttcagacatgtgatttttgacttgtattttc 744

                                                                       
Query: 545 aactagcacttactattttttttctaattgacatgagtagtattttactttatttcaagg 604
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 745 aactagcacttactattttttttctaattgacatgagtagtattttactttacttcaagg 804

                                                                       
Query: 605 actattcatcaagctattttaatttatatgcacatgtatctttcaatgttattgtatgtt 664
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tctattcatcaagctattttaatttatatgcacatgtatctttcaatgttattgtatgtt 864

                                     
Query: 665 cataattcctaacttcgttacagccc 690
           ||||||||||||||||||||||||||
Sbjct: 865 cataattcctaacttcgttacagccc 890


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space:   734400
Effective search space used:   734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no317_b07.g1 MSMg01no317_b07.g1 CHROMAT_FILE:
MSMg01no317_b07.g1 PHD_FILE: MSMg01no317_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:01 2005
         (310 letters)



>mm_chr14_109187181_109187890
          Length = 710

 Score =  582 bits (301), Expect = e-171
 Identities = 307/309 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccatgctgctgttgctcaagtgtttcaaagaaaactgcattgttgagattttatgggtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccatgctgctgttgctcaagtgtttcaaagaaaactgcattgttgagattttatgggtgc 450

                                                                       
Query: 61  agcttacctgcattctctttttcccataatgttctctgagtctttttatagaggttacca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agcttacctgcattctctttttcccataatgttctctgagtctttttatagaggttacca 390

                                                                       
Query: 121 attggacttaagaacttctcaggggcgtccaagaaattttaaaaactatagaaactagtt 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 attggacttaagaacctctcaggggcgtccaagaaattttaaaaactatagaaactagtt 330

                                                                       
Query: 181 ctcctgttcatgaacaatataagctaatactcctgtccttgaacaatataagctagttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctcctgttcatgaacaatataagctaatactcctgtccttgaacaatataagctagttct 270

                                                                       
Query: 241 actgtccttgaacaatataagctaatactcctgtccttgaatgatataagctagttctac 300
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 269 actgtccttgaacaatataagctaatactcctgtccttgaacgatataagctagttctac 210

                    
Query: 301 tgtccttga 309
           |||||||||
Sbjct: 209 tgtccttga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space:   211001
Effective search space used:   211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)