Query= MSMg01no318_l22.b1 MSMg01no318_l22.b1 CHROMAT_FILE:
MSMg01no318_l22.b1 PHD_FILE: MSMg01no318_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:58 2005
(243 letters)
>mm_chr14_113683272_113683915
Length = 644
Score = 397 bits (205), Expect = e-115
Identities = 229/237 (96%), Gaps = 1/237 (0%)
Strand = Plus / Minus
Query: 4 gaattcaactggaattt-acacaacaaaagaaatgccatcttcttgtgtattttctggga 62
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 405 gaattcaactggaatttaaaacaacaaaagaaatgccatcttcttgtgtattttctgaga 346
Query: 63 aatattctgtatgtgtttcctcccatctaagtaaaattagcaagcacttgggtagtagaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 345 aatattctgtatgtgtttcctcccatctaagtaaaattagcaagcacttgggtagtaaaa 286
Query: 123 tttcaccctagatttatttttgcaagtgaacacatttttttctttctttgacatatatat 182
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 285 tttcaccctagatttatttttgcaagtgaacacattttcttctttctttgacatatatat 226
Query: 183 gtattgtacatatatatatatatgtgtgtgtgtgtgtgtgtgagtgtgtgtttgtgt 239
||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct: 225 gtattgtacatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no318_l22.g1 MSMg01no318_l22.g1 CHROMAT_FILE:
MSMg01no318_l22.g1 PHD_FILE: MSMg01no318_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:58 2005
(662 letters)
>mm_chr14_113528132_113529193
Length = 1062
Score = 1249 bits (646), Expect = 0.0
Identities = 658/662 (99%)
Strand = Plus / Plus
Query: 1 ttcatgagtgctgtgatctgctccctcttgagtgtctacaggtgctttgggtttcaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatgagtgctgtgatctgctccctcttgagtgtctacaggtgctttgggtttcaagac 260
Query: 61 tcacctctttaacttgtcaaaagctagttgctcttcttgaatatgacattgaaccaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacctctttaacttgtcaaaagctagttgctcttcttgaatatgacattgaaccaaacc 320
Query: 121 accaaagtattgaatgaagtgagacctcactgcacagtaaaatgcttaggatctaggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accaaagtattgaatgaagtgagacctcactgcacagtaaaatgcttaggatctaggagc 380
Query: 181 agctgggtatattggaaattgggaatgaattttatttaacaatatgcaaatttcaattgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgggtatattggaaattgggaatgaattttatttaacaatatgcaaatttcaattgc 440
Query: 241 actatattaaaattttcatgaataaattcaaattttcataattatgtatgtcacagatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actatattaaaattttcatgaataaattcaaattttcataattatgtatgtcacagatat 500
Query: 301 tttctgtaatctacattcatttttgcattgtagttttcagtagatactccccccctattc 360
|||||||||||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct: 501 tttctgtaatctacattcatttttgcattgtagttttcagtagatactttcctcttattc 560
Query: 361 tgtcactcaggcttctgatttgctcttcttttaatgaatcatccacaagtacatatcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtcactcaggcttctgatttgctcttcttttaatgaatcatccacaagtacatatcaaa 620
Query: 421 cattaatctaaataaactgatgtacatttataatgttttcactttggaatgatttgttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cattaatctaaataaactgatgtacatttataatgttttcactttggaatgatttgttga 680
Query: 481 agaaaatgctaacaagttcataaagcattaaatatatcatcttatttaggatgtcctcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaaaatgctaacaagttcataaagcattaaatatatcatcttatttaggatgtcctcaa 740
Query: 541 tgtatattttatgaataactgctaagtctttatctagaggctaccaattctgtcttgatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtatattttatgaataactgctaagtctttatctagaggctaccaattctgtcttgatt 800
Query: 601 agtgaggtaacagaaacacaaatgatattttcaagtttctaccttaagtctcattctgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agtgaggtaacagaaacacaaatgatattttcaagtttctaccttaagtctcattctgtt 860
Query: 661 at 662
||
Sbjct: 861 at 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
