Query= MSMg01no318_n08.b1 MSMg01no318_n08.b1 CHROMAT_FILE:
MSMg01no318_n08.b1 PHD_FILE: MSMg01no318_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:05 2005
(374 letters)
>mm_chr14_46089696_46090469
Length = 774
Score = 692 bits (358), Expect = 0.0
Identities = 367/370 (99%)
Strand = Plus / Minus
Query: 3 ggaattcttaatattctccccatttgaggccatatctgacagtctgcatactttgctctt 62
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggaattcttaatattctccacatttgaggccatatctgacagtctgcatactttgctctt 513
Query: 63 actaattaccatagacatttatgtgaccttaaagatagcacatttgcccacttgaaggta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 actaattaccatagacatttatgtgaccttaaagatagcacatttgcccacttgaaggta 453
Query: 123 tgaccagaaagtttactactgtgtgttagaatacaggacactggtgataggctgcaggtc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgaccagaaagtttactactgtgtgttagaatacaggacactggtgataggctgcaggtc 393
Query: 183 tttgcattgagtgtccctacagatagacttcatcgggtaaatggagtcttcagaagttca 242
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tttgcattgcgtgtccctacagatagacttcatcgggtaaatggagtcttcagaagttca 333
Query: 243 gagccacttaacactttgagaagcagccataccagattctgttgctctctgtataaaatc 302
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 332 gagccacttaacactttgagaagcagccacaccagattctgttgctctctgtataaaatc 273
Query: 303 tctcaggctcggcttgacatcagagcttattatattgttagtattctgagttactatgca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tctcaggctcggcttgacatcagagcttattatattgttagtattctgagttactatgca 213
Query: 363 catttaaagt 372
||||||||||
Sbjct: 212 catttaaagt 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_n08.g1 MSMg01no318_n08.g1 CHROMAT_FILE:
MSMg01no318_n08.g1 PHD_FILE: MSMg01no318_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:05 2005
(346 letters)
>mm_chr14_45911883_45912629
Length = 747
Score = 634 bits (328), Expect = 0.0
Identities = 340/344 (98%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 tcatcgaagtgcaaaggaaatgacctgcatttaaacagaaaaggctcatgttcatgaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatcgaagtgcaaaggaaatgacctgcatttaaacagaaaaggctcatgttcatgaatt 260
Query: 61 agaagcatcgaaaaacttgctaatatattttatttgtcagagataaataatacaatttta 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaagcatcaaaaaacttgctaatatattttatttgtcagagataaataatacaatttta 320
Query: 121 ggaataaaattcagtaacgccaacaccaatgcaaatgaatatttatcctcaaatacaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaataaaattcagtaacgccaacaccaatgcaaatgaatatttatcctcaaatacaaat 380
Query: 181 tctaagtgtattagaagtgtggcctcaaacttaaaagactgtgcaaatgaaaataatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaagtgtattagaagtgtggcctcaaacttaaaagactgtgcaaatgaaaataatgct 440
Query: 241 ggtattaagaacataaaaaacaaaaatgtagtacacagttcaaagcaaatccaagctatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtattaagaacataaaaaacaaaaatgtagtacacagttcaaagcaaatccaagctatt 500
Query: 301 ctagaagctctgggcagccagt-gatacatacccacattcccag 343
||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 501 ctagaagctctgggcggccaggcgatacatacccacattcccag 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 747
Length adjustment: 9
Effective length of query: 337
Effective length of database: 738
Effective search space: 248706
Effective search space used: 248706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
