Query= MSMg01no321_d10.b1 MSMg01no321_d10.b1 CHROMAT_FILE:
MSMg01no321_d10.b1 PHD_FILE: MSMg01no321_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:54 2005
(292 letters)
>mm_chr14_34186222_34186912
Length = 691
Score = 526 bits (272), Expect = e-154
Identities = 287/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Plus
Query: 1 atggtagctgagtaggtcagcccaacagcatccccccctacttcccagcaggtctattta 60
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 201 atggtagctgagtaggtcagcccaacagcat-ccctcctacttcccagcaggtctattta 259
Query: 61 aagagagcaattaacagggtctggtggcatactgctgacatgagaacagtggaggtggac 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 260 aagagagcaattaacagggtctggtggcatactgctgacatgagaacggtggaggtggac 319
Query: 121 ctttgacagactgtatgggtgtcagcaaaggctagaggaatggagaagctggcctgagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctttgacagactgtatgggtgtcagcaaaggctagaggaatggagaagctggcctgagga 379
Query: 181 caagcaggatgaatgcactctgctgcctctggggtcctgggaaaggagggaggcacctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caagcaggatgaatgcactctgctgcctctggggtcctgggaaaggagggaggcacctta 439
Query: 241 gcattctgtgtataggaagtacttgaccacagtaccttctcaagcccatcca 292
|||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcattctgtgaagaggaagtacttgaccacagtaccttctcaagcccatcca 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no321_d10.g1 MSMg01no321_d10.g1 CHROMAT_FILE:
MSMg01no321_d10.g1 PHD_FILE: MSMg01no321_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:54 2005
(232 letters)
>mm_chr14_34346777_34347408
Length = 632
Score = 426 bits (220), Expect = e-124
Identities = 229/232 (98%)
Strand = Plus / Minus
Query: 1 tgataatggactgaaccgctgagcctgtaagccagccccaattaaatgttgtcctttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgataatggactgaaccgctgagcctgtaagccagccccaattaaatgttgtcctttata 486
Query: 61 agacttgccttgatcgtggtgtctgttcactgtagtaaaaccctaagaaaaactgacacc 120
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 485 agacttgccttgatcgtagtgtctgttcacagtagtaaaaccctaagaaaaactgacacc 426
Query: 121 aatatgtgggtgctcggatcttgggaacagccagcagcaggcctccagtgcagccaacca 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 425 aatatgtgggtgctcggatcttgggaacagccagcagcaggcctccagcgcagccaacca 366
Query: 181 ccaaagtagtgctatctagcctgtccctgatatccttaccacactggttaca 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccaaagtagtgctatctagcctgtccctgatatccttaccacactggttaca 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
