Query= MSMg01no321_i24.b1 MSMg01no321_i24.b1 CHROMAT_FILE:
MSMg01no321_i24.b1 PHD_FILE: MSMg01no321_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:20 2005
(324 letters)
>mm_chr14_38122599_38123322
Length = 724
Score = 468 bits (242), Expect = e-136
Identities = 303/328 (92%), Gaps = 14/328 (4%)
Strand = Plus / Minus
Query: 7 attctgggaaatgaa-cataggatggcaatatcagagaaagcagaattctggttattcta 65
||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 398 attctgggaaatgaagc-taggatgacaatatcagagaaagcagaattctggttattcta 340
Query: 66 aaggctgaacacttcacgtaagacatgggtctgaatgtaggaaagagcaaactatggtac 125
|||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 339 aaggctgaacacttcaggtaagacatgggtctgaacgtaggaaagagcaaactgtggtac 280
Query: 126 caagactggcaggaaagggacccctttgtgaaatagagtcaaagatagatgtgacaccaa 185
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 caagactggcaagaaagggacccctttgtgaaatagagtcaaagatagatgtgacaccaa 220
Query: 186 actaaattaaaca----tgat---ggcacaagatattttgtattcaaaatccctagaaca 238
||||||||||||| | || |||||||||||||||| || || |||||||||||||
Sbjct: 219 actaaattaaacaagcctcatgggggcacaagatattttgcatgcagaatccctagaaca 160
Query: 239 tagagcatgc--gcaaataaggattttgg-tttctagaagaagtatgtgtaggcgatcac 295
|||||||||| | |||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 159 tagagcatgcttg--aataaggattttggttttttagaagaagtatgtggaggcgatcac 102
Query: 296 tcagattttttactccaaagcataggac 323
||||||||||||||||||||||||||||
Sbjct: 101 tcagattttttactccaaagcataggac 74
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_i24.g1 MSMg01no321_i24.g1 CHROMAT_FILE:
MSMg01no321_i24.g1 PHD_FILE: MSMg01no321_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:20 2005
(539 letters)
>mm_chr14_37941188_37942125
Length = 938
Score = 978 bits (506), Expect = 0.0
Identities = 530/538 (98%), Gaps = 3/538 (0%)
Strand = Plus / Plus
Query: 1 actgtggggctagagagatggctcagtgcttaagagtgctgagagagtactgagagagta 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 actgtggggctagagagatggctcagtgcttaagagtactgagagagtactgagagagta 260
Query: 61 cgtcagccaggagggctcagtgccaggtgggaactgagagatgtagggagaacctggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtcagccaggagggctcagtgccaggtgggaactgagagatgtagggagaacctggtgg 320
Query: 121 tctggtctattttgatatgttaaatagacacctcagccatttgttccaggtttgagacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctggtctattttgatatgttaaatagacacctcagccatttgttccaggtttgagacct 380
Query: 181 aacatcttgaagtgccattaggatgggacagatctgtcactattgcgcaaagagcctacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacatcttgaagtgccattaggatgggacagatctgtcactattgcgcaaagagcctacc 440
Query: 241 cgaaaagctcctgtct-taagtcattcggtcaggtagaaaggaagggtatgaatgtgtct 299
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgaaaagctcctg-caataagtcattcggtcaggtagaaaggaagggtatgaatgtgtct 499
Query: 300 ctgcgcatttatgatatgtatatacattaatggcttgcatgtggaggcgacagcacagct 359
|||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 500 ctgcgcatttatgatatgtatatacagtaatggcttgcatgtggaggtgagagcacagct 559
Query: 360 ttatgaaaactggttctcttcttcctgttgtggattctgaggatgaacacaagacctcag 419
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 560 ttatgaaaactggttctcttcttcctgttgtggattctgag-atgaacacaagacctcag 618
Query: 420 gtttgcatttggagctcagttagaaatttatctgctgacctatctcactgctctgccagg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gtttgcatttggagctcagttagaaatttatctgctgacctatctcactgctctgccagg 678
Query: 480 atgttttttgtttgttggtttgatttatttttcttttgtttgttttatgtttatttag 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atgttttttgtttgttggtttgatttatttttcttttgtttgttttatgtttatttag 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 938
Length adjustment: 10
Effective length of query: 529
Effective length of database: 928
Effective search space: 490912
Effective search space used: 490912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
