Query= MSMg01no321_l16.b1 MSMg01no321_l16.b1 CHROMAT_FILE:
MSMg01no321_l16.b1 PHD_FILE: MSMg01no321_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:32 2005
(348 letters)
>mm_chr14_124548611_124549357
Length = 747
Score = 650 bits (336), Expect = 0.0
Identities = 345/348 (99%), Gaps = 1/348 (0%)
Strand = Plus / Minus
Query: 1 gaaattaagacaattaattcagatatatgtgatgcagggggaacagaaagcactgctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gaaattaagacaattaattcagatatatgtgatgcagggggaacagaaagcactgctgta 488
Query: 61 ttgtttttatatattttntgagaatgtcacacacaaatacaatatttacatcataaccat 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ttgtttttatatatttt-tgagaatgtcacacacaaatacaatatttacatcataaccat 429
Query: 121 tttacatgctccaactgccaatattttccatgttatcccaactccttctcaactttataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tttacatgctccaactgccaatattttccatgttatcccaactccttctcaactttataa 369
Query: 181 cctttttcttcttcaatcattattgttatgtatacacacatgtatttaccaatatagacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cctttttcttcttcaatcattattgttatgtatacacacatgtatttaccaatatagacg 309
Query: 241 gctgagtctatttagagtaaatagtttatttagaatcatagattgcacatgtgtttgtga 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gctgaatctatttagagtaaatagtttatttagaatcatagattgcacatgtgtttgtga 249
Query: 301 gcttgtgtatgttgcccacatgcacaggcatgcatatatgtgcaaggt 348
|||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 248 gcttgtgtatgttgcccacatgcacaggcatgcatatatgtgaaaggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 747
Length adjustment: 9
Effective length of query: 339
Effective length of database: 738
Effective search space: 250182
Effective search space used: 250182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_l16.g1 MSMg01no321_l16.g1 CHROMAT_FILE:
MSMg01no321_l16.g1 PHD_FILE: MSMg01no321_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:32 2005
(636 letters)
>mm_chr14_124377674_124378709
Length = 1036
Score = 1178 bits (609), Expect = 0.0
Identities = 629/641 (98%), Gaps = 10/641 (1%)
Strand = Plus / Plus
Query: 1 ttctgagaagaaaacatggaattttattaagtgtacatacagttaacaaatatttttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctgagaagaaaacatggaattttattaagtgtacatacagttaacaaatatttttcca 260
Query: 61 aacagtttagtactaaacattttgaagctttttatatctgttatagaacactttgcatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagtttagtactaaacattttgaagctttttatatctgttatagaacactttgcatga 320
Query: 121 aatctttaaggtgcatctccagcaattcacagcctttctaagtatccctaaactttgagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatctttaaggtgcatctccagcaattcacagcctttctaagtatccctaaactttgagt 380
Query: 181 ttacagaattcaattcaaaatgaaattaaagcaataaaacaaaattaaataaatcaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttacagaattcaattcaaaatgaaattaaagcaataaaacaaaattaaataaatcaaatg 440
Query: 241 cccaaaccccaattgctggagtatgttgggttgtctttagttttatttagggtactcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccaaaccccaattgctggagtatgttgggttgtctttagttttatttagggtactcaac 500
Query: 301 aaactgtattctgaaatcttgacaaatcagctctaaccagcctg-----ccccccccaac 355
|||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 501 aaactgtattctgaaatcttgacaaatcagctctaaccagcctgttgggcct-----aac 555
Query: 356 atagctgagttagaggtatatactgctgacatccaggataccaggccccatgctgagcta 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atagctgagttagaggtatatactgctgacatccaggataccaggccccatgctgagcta 615
Query: 416 aaaacaaaacaaaacaaaacaaaaccaatcaaaacccaaaataaaagagcaaacaaaacc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaaacaaaacaaaacaaaacaaaaccaatcaaaacccaaaataaaagagcaaacaaaacc 675
Query: 476 cctaatacatccagttttaaagcttgtcattaaataccaaaaatattaaagtctaattta 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cctaatacatccagttttaaagcttgtcattaaataccaaaaatattaaagtctaattta 735
Query: 536 tactaacgtgtgcattgctgctgcaggaaagaacacaacagccgccttgcccatgctttg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tactaacgtgtgcattgctgctgcaggaaagaacacaacagccgccttgcccatgctttg 795
Query: 596 ctgaggatgaggataactggagtgcagcccaaatcaggtgt 636
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 796 ctgaggatgaggataactggaatgcagcccaaatcaggtgt 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
