Query= MSMg01no322_g15.b1 MSMg01no322_g15.b1 CHROMAT_FILE:
MSMg01no322_g15.b1 PHD_FILE: MSMg01no322_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:22 2005
(348 letters)
>mm_chr14_78226400_78227150
Length = 751
Score = 656 bits (339), Expect = 0.0
Identities = 347/351 (98%), Gaps = 3/351 (0%)
Strand = Plus / Minus
Query: 1 ctaaaaacgaactgatttaattttatttgaggacattgtaaatctaagattccattataa 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctaaaaatgaactgatttaattttatttgaggacattgtaaatctaagattccattataa 438
Query: 61 atgttgtaatagaatcatttcagagaacagggagaatttcttttagcattatttttatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atgttgtaatagaatcatttcagagaacagggagaatttcttttagcattatttttatta 378
Query: 121 tcactgttattattgttagttcatttatcataccactacatattatacatttgcctttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tcactgttattattgttagttcatttatcataccactacatattatacatttgcctttta 318
Query: 181 tgaatgcatttattttttgaaatt---ataagacatgaaaagattcccttagatgaattt 237
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 317 tgaatgcatttattttttgaaattatgataagacatgaaaagattcccttagatgaattt 258
Query: 238 gcctccttcttaaaggaatgaatatttattgcttttaaaatgtagctatggggaaacttt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcctccttcttaaaggaatgaatatttattgcttttaaaatgtagctatggggaaacttt 198
Query: 298 tattttgtttaattaataatatatgtaattttagaaaatattctggccaaa 348
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tattttgtttaattaataatatatgtaattttagaaaatattctggccaaa 147
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 751
Length adjustment: 9
Effective length of query: 339
Effective length of database: 742
Effective search space: 251538
Effective search space used: 251538
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_g15.g1 MSMg01no322_g15.g1 CHROMAT_FILE:
MSMg01no322_g15.g1 PHD_FILE: MSMg01no322_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:22 2005
(179 letters)
>mm_chr14_78048922_78049500
Length = 579
Score = 306 bits (158), Expect = 7e-88
Identities = 173/178 (97%)
Strand = Plus / Plus
Query: 2 cttcacttctgggagggaaaagaaagagccctaccgaaacctaactcttggaggcgcatc 61
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 202 cttcacttctgggagggaaaagaaagagccctaataaaacctaactcttggaggcgcatc 261
Query: 62 gcatcctgatttctctcacgcctccattaattaatctgatcatcaaatgcttcctcatta 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 262 gcatcctgatttctctcacgcctccattaattaatctgatcatcaaatgcttcctcgtta 321
Query: 122 gtaatcatcgctctgaaaaataatggggcctgtggatgaatcaatgcaggagtcgggg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 322 gtaatcatcgctctgaaaaataatggggcctgtggatgaatcaatgcaggagccgggg 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
