Query= MSMg01no322_o24.b1 MSMg01no322_o24.b1 CHROMAT_FILE:
MSMg01no322_o24.b1 PHD_FILE: MSMg01no322_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:00 2005
(692 letters)
>mm_chr14_28294438_28295533
Length = 1096
Score = 1118 bits (578), Expect = 0.0
Identities = 612/636 (96%), Gaps = 22/636 (3%)
Strand = Plus / Minus
Query: 5 gaattcaactgtactgttcaatatagcttgaggtactaagccaaaatcctataaatattt 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gaattcaactgtactgttaaatatagcttgaggtactaagccaaaatcctataaatattt 559
Query: 65 acactgctggcttatacctgtgtaaaaacactatacaaaagctttaatca----aaatag 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 558 acactgctggcttatacctgtgtaaaaacactatacaaaagctttaatcaaaataaatag 499
Query: 121 ttgacatttcagcaaaattagttatcatctgacattaaagaacgtcattactatttacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttgacatttcagcaaaattagttatcatctgacattaaagaacgtcattactatttacca 439
Query: 181 ttcttttataaacatgaaattttacatataaaacagacttcaatttgaagcccaagtaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttcttttataaacatgaaattttacatataaaacagacttcaatttgaagcccaagtaca 379
Query: 241 ggtaacaaatgtaaaactgaaaggtgctaacatgagataatctgattacaatatgtcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggtaacaaatgtaaaactgaaaggtgctaacatgagataatctgattacaatatgtcaaa 319
Query: 301 aaattatttcaaattttcagatgcttcaatgttatataggccatcatgatttaaataaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaattatttcaaattttcagatgcttcaatgttatataggccatcatgatttaaataaac 259
Query: 361 aggaaaggaaaaaaaattcacaaaggccaagaaacttgtttataaatcatcaattcactt 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 258 aggaaaggaaaaaaaattcagaaaggccaagaaacttgtttataaatcatcaat------ 205
Query: 421 ttaagaaactgaaaaaagtccaccacaacctattttttttaatcactgtaatttctcctt 480
|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 -------ac-----aaagtccaccacaacctattttttttaatcactgtaatttctcctt 157
Query: 481 gaacacatccttaacttaatggagatttctctgtacccgagtttttgtaagcagataaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gaacacatccttaacttaatggagatttctctgtacccgagtttttgtaagcagataaaa 97
Query: 541 agtaattttcattttcttgagaccgagttgatgaaagggcatatggtgtccccagaaacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 agtaattttcattttcttgagaccgagttgatgaaagggcatatggtgtccccagaaacg 37
Query: 601 tctggtgcgtgagaacattaaaatgactacactgat 636
||||||||||||||||||||||||||||||||||||
Sbjct: 36 tctggtgcgtgagaacattaaaatgactacactgat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1096
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1086
Effective search space: 740652
Effective search space used: 740652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_o24.g1 MSMg01no322_o24.g1 CHROMAT_FILE:
MSMg01no322_o24.g1 PHD_FILE: MSMg01no322_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:00 2005
(501 letters)
>mm_chr14_28128720_28129614
Length = 895
Score = 878 bits (454), Expect = 0.0
Identities = 485/498 (97%), Gaps = 6/498 (1%)
Strand = Plus / Plus
Query: 1 atttacagaaggaagaaaatgtgggcttgtatcagctctgtaagagcacttgagttcctc 60
||||||||||||||||||| |||||||||||||||||||||||| | |||||||||
Sbjct: 201 atttacagaaggaagaaaacgtgggcttgtatcagctctgtaag-g-----gagttcctc 254
Query: 61 aggtacgcctctctagggaaggtgcagagaggccgaggcctggggagtagaaagcagagc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 255 aggtacgcctctctagggaaggtgcagagaggccgaggcctggggcgtagaaagcagagc 314
Query: 121 tgtggagcaggttgggataaacagcaactgggacaaaaatagggtacactagactggacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgtggagcaggttgggataaacagcaactgggacaaaaatagggtacactagactggacc 374
Query: 181 ccagccatgccagccacaggtgacccaggaggaagcttcacagtactcagtctcagtcat 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 375 ccagccatgccagccacaggtgacccaggaggaagcttcacagtactcggtctcagtcat 434
Query: 241 ggagccaaccaccatgggtgcttggagctctcctctttttctcccccctcgtggaatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggagccaaccaccatgggtgcttggagctctcctctttttctcccccctcgtggaatgag 494
Query: 301 acaccatcacatgctgtaacattacactatgggataactccaagttcccgaccaaagttg 360
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 495 acaccatcacatgctgtaacattacactatgggataactccaagttcctgagcaaagttg 554
Query: 361 gtagattcctagcacaggccattggaaagatatttgggggaggagaagggcgatatttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtagattcctagcacaggccattggaaagatatttgggggaggagaagggcgatatttct 614
Query: 421 tcatttggttttagcagattccaaagacaaagaagatgagagggaggaggagggaggagg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tcatttggttttagcagattccaaagacaaagaagatgagagggaggaggagggaggaga 674
Query: 481 aaaaggagggatggagga 498
||||||||||||| ||||
Sbjct: 675 aaaaggagggatgaagga 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 895
Length adjustment: 10
Effective length of query: 491
Effective length of database: 885
Effective search space: 434535
Effective search space used: 434535
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
