Query= MSMg01no322_p18.b1 MSMg01no322_p18.b1 CHROMAT_FILE:
MSMg01no322_p18.b1 PHD_FILE: MSMg01no322_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:03 2005
(286 letters)
>mm_chr14_60416283_60416968
Length = 686
Score = 373 bits (193), Expect = e-108
Identities = 223/233 (95%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 1 cagttggtttcttctgggttttctggataaccaatcatctatgaccctacttgtatggtg 60
|||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||||
Sbjct: 201 cagttgatttcttctgggttttctggataaccaatcatatatgaccttacttgcatggtg 260
Query: 61 gctgcttcatttgcatgcgtgtttgcataagcattgaaactgctcacgactccccc-gat 119
||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| | |
Sbjct: 261 gctgcttcatttgcacgcgtgtttgcataagcattgaaactgctcaggactccccccg-t 319
Query: 120 gttgtttaagcttcttgttggctgttgaaaactctggggtgattctgaactctgcagtga 179
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 320 gttgtttaagcttcttgttggctgttgaaaactttggggtgattctgaactctgcagtga 379
Query: 180 tgatatgatggctgctcctcctgccgagacagccagtccgctgactaacttct 232
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgatatgatggctgttcctcctgccgagacagccagtccgctgactaacttct 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_p18.g1 MSMg01no322_p18.g1 CHROMAT_FILE:
MSMg01no322_p18.g1 PHD_FILE: MSMg01no322_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:03 2005
(234 letters)
>mm_chr14_60574618_60575248
Length = 631
Score = 397 bits (205), Expect = e-115
Identities = 225/233 (96%), Gaps = 3/233 (1%)
Strand = Plus / Minus
Query: 1 attagggatcagtctggtggggatgcatgagcccttgttaacaaccttgttcttcaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 attagggatcagtctggtggggatgcatgagcccttgttaacaaccttgttcttcaggat 371
Query: 61 cctatggggaactggcttttggctacagatagcccttaaagctggctgctggttgatttg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cctatggggaactggcttttggctacagatagcccttaaagctggctgctggttgattt- 312
Query: 121 aggagatacaactaaaatgtataaaaacttgcatctgttcttaaggtgcctttgagcaag 180
||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 311 --gagatacaactgaaatgtataaaaacttgcacctgtgcttaaggtgcctttgagcaag 254
Query: 181 gtgtcttaattcttcacatgactcttattgcatcaaagaaaatattgtacatg 233
|||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 gtgtcttaattcctcacatgactcttattgcatcaaagaaaattttgtacatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 631
Length adjustment: 9
Effective length of query: 225
Effective length of database: 622
Effective search space: 139950
Effective search space used: 139950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
