Query= MSMg01no324_g15.b1 MSMg01no324_g15.b1 CHROMAT_FILE:
MSMg01no324_g15.b1 PHD_FILE: MSMg01no324_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:43 2005
(638 letters)
>mm_chr14_70856833_70857871
Length = 1039
Score = 1172 bits (606), Expect = 0.0
Identities = 627/634 (98%), Gaps = 1/634 (0%)
Strand = Plus / Plus
Query: 6 gaattccaagtatccggtgtgttgaacggacttcaggaggcatcttgccctggaagaatg 65
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccaagtaggaggtgtgttgaacggacttcaggaggcatcttgccctggaagaatg 265
Query: 66 ggggaaaggtggcagaagctacagctgctgcctccaaggacatctgtatagctcccaggg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggggaaaggtggcagaagctacagctgctgcctccaaggacatctgtatagctcccaggg 325
Query: 126 gaccctctgccctttccccctcccacaagcctgggcgagcagggaccaagcttgcttgtt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaccctctgccctttccccctcccacaagcctgggcgagcagggaccaagcttgcttgtt 385
Query: 186 atcacctgacgctgagcagccactgatcccattggtggagccagattcggtctggctctc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atcacctgacgctgagcagccactgatcccattggtggagccagattcggtctggctctc 445
Query: 246 ctgttccttctcgatttctctgcctctctctcctccacgctgctttgatttcgctcttgc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ctgttccttctcgatttctctgcctctctctcctccacgctgctttgatttcgctcttgc 505
Query: 306 ctctcttcttgcgcgcttactcgctgggttcccagcaacgccgccgttttcttgccggga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctctcttcttgcgcgcttactcgctgggttcccagcaacgccgccgttttcttgccggga 565
Query: 366 gcaccacctatagctgcagagccagacaggcgctgcctgtggggcatggaagccgacttc 425
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gcagtagctatagctgcagagccagacaggcgctgcctgtggggcatggaagccgacttc 625
Query: 426 ccagtagcccagagaggagcgagcgagccccgctgcctgtgaccccaggcgtcaggctgc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ccagtagcccagagaggagcgagcgagccccgctgcctgtgaccccaggcgtcaggctgc 685
Query: 486 tgtcccctgcctggagagatcatcatctatctacacagagtctctcccttccttctcttc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgtcccctgcctggagagatcatcatctatctacacagagtctctcccttccttctcttc 745
Query: 546 caagtatccctctgcagggccggctgaagccaggtaagtgcgcttctcccccc-aaacca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 746 caagtatccctctgcagggccggctgaagccaggtaagtgcgcttctcccccccaaacca 805
Query: 605 tcctgcctattctgggaggttaagagctgcggcc 638
||||||||||||||||||||||||||||||||||
Sbjct: 806 tcctgcctattctgggaggttaagagctgcggcc 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1039
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1029
Effective search space: 646212
Effective search space used: 646212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_g15.g1 MSMg01no324_g15.g1 CHROMAT_FILE:
MSMg01no324_g15.g1 PHD_FILE: MSMg01no324_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:44 2005
(497 letters)
>mm_chr14_71063311_71064207
Length = 897
Score = 806 bits (417), Expect = 0.0
Identities = 462/481 (96%), Gaps = 11/481 (2%)
Strand = Plus / Minus
Query: 1 cttcttaggagtcctagaaaaaccatcctggcacatgctcaggagaacctgggatactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cttcttaggagtcctagaaaaaccatcctggcacatgctcaggagaacctgggatactaa 417
Query: 61 ttctgaagtaaataagacaaagggactaggaagctgtctcacaaacactagaaaaacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ttctgaagtaaataagacaaagggactaggaagctgtctcacaaacactagaaaaacctt 357
Query: 121 gaagtaacagctggtcaacaaaaccccagtgtccttccctctctcctacagaagagacac 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 356 gaagtaacagctggtcaacaaaaccccagtgtccttccctctctcctacggaagagacac 297
Query: 181 tggggatgatagtacctttgctcagtcacggcaac-gtgcttaagcttcagatcttccat 239
| |||||||||||||||||| ||||||||||| || |||||||||||| ||||||||||
Sbjct: 296 tagggatgatagtacctttggtcagtcacggc-acagtgcttaagcttgagatcttccac 238
Query: 240 ggccccttgctgtgtaagactccgctgacaaaggttt-ccctggcatagtagtgcatgcc 298
|||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 237 ggccccaagctgtgtaagactccgctgacaaaggtttgccctgacatagtagtgcatgcc 178
Query: 299 tttagccccagcaattgggaagcaaagattggcaaattgaa----ccccgaggtcaggta 354
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 177 tttagccccagcaattgggaagcaaagattggcaaattgaagttt----gaggtcaggta 122
Query: 355 ggactacaaagaaaccatggatggggagagagagaagggaaggtttttaggatttgggaa 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggactacaaagaaaccatggatggggagagagagaagggaaggtttttaggatttgggaa 62
Query: 415 atgaaaacaggattagttcaatatataccttggctacacaacaaagccattctggactac 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgaaaacaggattagttcaatatataccttggctacacaacaaagccattctggactac 2
Query: 475 a 475
|
Sbjct: 1 a 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
