Query= MSMg01no325_p21.b1 MSMg01no325_p21.b1 CHROMAT_FILE:
MSMg01no325_p21.b1 PHD_FILE: MSMg01no325_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:36 2005
(402 letters)
>mm_chr14_57145182_57145983
Length = 802
Score = 731 bits (378), Expect = 0.0
Identities = 393/398 (98%)
Strand = Plus / Plus
Query: 5 gaattcaaggccagtctgccctacagagtgagtttcaagctatacaatggagactggtct 64
|||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||
Sbjct: 205 gaattcaaggccagcctgacctacagagtgagttccaggctatacaatggagactggtct 264
Query: 65 ccaaacagtaaaaacaaaaaagcaaagatacttatatatatttaaaaaaaaacctgtatg 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 265 ccaaacagtaaaaacaaaaaagcaaagatacttatatatattaaaaaaaaaacctgtatg 324
Query: 125 tttacaacaaagtaataatattttcctaactatggaaaacacatgcactagataagccac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttacaacaaagtaataatattttcctaactatggaaaacacatgcactagataagccac 384
Query: 185 ttacttttgtgtttcaaagaatgtaaaacagatgcagtatggtaaaactttaattttaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttacttttgtgtttcaaagaatgtaaaacagatgcagtatggtaaaactttaattttaaa 444
Query: 245 attcaaacataatctttttatttagacacacacattatataaattaaacaattgaacata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attcaaacataatctttttatttagacacacacattatataaattaaacaattgaacata 504
Query: 305 taagagatgtacatactctgaacagaaaaagcacttagtgttacttcatgattaatccca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taagagatgtacatactctgaacagaaaaagcacttagtgttacttcatgattaatccca 564
Query: 365 caaaagatcttcacatttctgtgtccattagcacatta 402
||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caaaagatcttcacatttctgtgtccattagcacatta 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_p21.g1 MSMg01no325_p21.g1 CHROMAT_FILE:
MSMg01no325_p21.g1 PHD_FILE: MSMg01no325_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:36 2005
(688 letters)
>mm_chr14_57309157_57310244
Length = 1088
Score = 774 bits (400), Expect = 0.0
Identities = 437/464 (94%), Gaps = 23/464 (4%)
Strand = Plus / Minus
Query: 248 atttctagatcttctttttgctctaatgtcctaagtactgctattataggcttggctttg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 atttctagatcttctttttgctctaatgtcctaagtactgctattataggcttggctttg 1029
Query: 308 gtctaccccaggactctgtacattctaggtaaggtcttttccaactgagctacatctcca 367
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1028 gtctaccccaggactgtgtacattctaggtaagctcttttccaactgagctacatctcca 969
Query: 368 gtcctagactaacattttaagatttcccagggttttctaagattttggtaactcata--- 424
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 968 gtcctagactaacattttaagatttccctgggttttctaagattttggtaactcatatgg 909
Query: 425 --------------------actaaattcataatctactgaagagagaatccctgcaggt 464
|||||||||||||||||||||||||||||||||||||| |
Sbjct: 908 aagtaatatatatgccacttactaaattcataatctactgaagagagaatccctgcagat 849
Query: 465 catcttttctgaacatttcctacacaaaccattccaaatatgatgtgttcaataaatttt 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 catcttttctgaacatttcctacacaaaccattccaaatatgatgtgttcaataaatttt 789
Query: 525 tcccactctgacttaaccatggtacgttcgttcgcctgacacttacgtctccaagtggct 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tcccactctgacttaaccatggtacgttcgttcgcctgacacttacgtctccaagtggct 729
Query: 585 cttcagcagttcatatacaagcacattattacactgctttgcaaagtacaatgcactatt 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cttcagcagttcatatacaagcacattattacactgctttgcaaagtacaatgcactatt 669
Query: 645 ttggtgctttgacaaaatgttgcagtcagctccacattcaatca 688
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ttggtgctttgacaaaatgttgcagtcagctccacattcaatca 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
