Query= MSMg01no326_b08.b1 MSMg01no326_b08.b1 CHROMAT_FILE:
MSMg01no326_b08.b1 PHD_FILE: MSMg01no326_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:43 2005
(661 letters)
>mm_chr14_34588402_34589462
Length = 1061
Score = 1239 bits (641), Expect = 0.0
Identities = 653/657 (99%)
Strand = Plus / Plus
Query: 5 gaattcatttatgtcttagttcaaggaaccttccgtaccacaagcaattatcttcaattt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttatgtgttagttcaaggaaccttccgtaccacaagcaattatcttcaattt 264
Query: 65 cctcacattgcttacagggtgaaagcttacaggagggatagccctctgatacatgagatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctcacattgcttacagggtgaaagcttacaggagggatagccctctgatacatgagatg 324
Query: 125 tacagtatgttcacactctgctgagaaactttttccatcaaaaagagccagagaacatta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tacagtatgttcacactctgctgagaaactttttccatcaaaaagagccagagaacatta 384
Query: 185 caaagcacacagcgagaactgagcggatatgagtgtgtttgagaaaaatgagctttgaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaagcacacagcgagaactgagcggatatgagtgtgtttgagaaaaatgagctttgaat 444
Query: 245 gtgagctctaatttaattattttagtagtacctatgcataaaaccctaggctctagttct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgagctctaatttaattattttagtagtacctatgcataaaaccctaggctctagttct 504
Query: 305 gacagcatgggttgtgtggaaatgtcttagtctggtgctcctggaatatgtcacatgttg 364
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gacagcatggattgtgtggaaatgtcttagtctggtgctcctggaatatgtcacatgttg 564
Query: 365 gtttataaccacttagttataaacactattaatatcaggtcatggaaagcaattcatttc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtttataaccacttagttataaacactattaatatcaggtcatggaaagcaattcatttc 624
Query: 425 tacagaaaagccatttggccataggaaaacggaaggcaatgctgtgaaatctgtaaatta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tacagaaaagccatttggccataggaaaacggaaggcaatgctgtgaaatctgtaaatta 684
Query: 485 cacatcaacactgaatcctattccagttcctgttcagaagaggtcagtgcgtagtttacc 544
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 685 cacatcaacactgaattctattccagttcctgttcagaagaggtcagtgcatagtttacc 744
Query: 545 aaactttagacagcataatggggaagaatatttgaagggcattttaaggaccgcaaacca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaactttagacagcataatggggaagaatatttgaagggcattttaaggaccgcaaacca 804
Query: 605 atgcttctattcgtctggttgttcacacctgttgggcaatataatgtcaaacatctc 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atgcttctattcgtctggttgttcacacctgttgggcaatataatgtcaaacatctc 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_b08.g1 MSMg01no326_b08.g1 CHROMAT_FILE:
MSMg01no326_b08.g1 PHD_FILE: MSMg01no326_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:43 2005
(660 letters)
>mm_chr14_34743456_34744520
Length = 1065
Score = 1178 bits (609), Expect = 0.0
Identities = 649/665 (97%), Gaps = 5/665 (0%)
Strand = Plus / Minus
Query: 1 caggacagccagagctacatagtgagactccgtcttgacaaaaagcaaacaccccccaaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 824 caggacagccagagctacatagtgagactccatcttgacaaaaagcaaacaccccccaaa 765
Query: 61 actgttttttcaaggagatagcaatatggggacaacagtatgtcattccactccaaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 actgttttttcaaggagatagcaatatggggacaacagtatgtcattccactccaaggct 705
Query: 121 cacattgccctctggagatgcaag-----gctgaggagggccaggcacactcagtgcatc 175
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 704 cacattgccctctggagatgcaaggccacgctgaggagggccaggcacactcagtgcatc 645
Query: 176 tgccgtgctctccagaggcggctggaagtcttctccttccctcctggctccaccaggtgt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tgccgtgctctccagaggcggctggaagtcttctccttccctcctggctccaccaggtgt 585
Query: 236 tccccagagccacctccatcaccccagccttgacagcaaggtaaactctctgccatgagg 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tccccagagccacctccatcaccccagccttgacagcaaggtaaactctctgccatgagg 525
Query: 296 aagtcctctgtagacttcagacggggagagaaggtcttttgtcgctcccaccttagtcac 355
||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 524 aagtcctctctagacttcagacggggagagaaggtcttttgtcgtttccaccttagtcac 465
Query: 356 tgaagaccaggagaagaccaaagtggctgggtgattttctccttcttctccaaccaaagt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgaagaccaggagaagaccaaagtggctgggtgattttctccttcttctccaaccaaagt 405
Query: 416 tttacctgcttggtgcagctgggagaggatcagagcttgtaagcccagaaggtgtgtact 475
|||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 404 tttacctgcttggtacagctgagagaggatcagagcttgtaagcccagaaggcgtgtact 345
Query: 476 gacgtggtgttacattcctctagagacagatctgtctgtatggcagccatttgcagagga 535
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gaagaggtgttacattcctctagagacagatctgtctgtatggcagccatttgcagagga 285
Query: 536 tgagctggggttatttttcaagaacccttgacttagagctgcagagaggttcagtggttc 595
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 284 tgagctggggttatttttcaagaacccttgacttagagctgcagaggggttcagtggttc 225
Query: 596 agagcacttgccgctcttgcagaggacccaggtttggatcccagtgcctacacaatagct 655
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 224 agagcacttgccgctcttgcagaggacccaggtttggatcccagtacctacacaatagct 165
Query: 656 catga 660
|||||
Sbjct: 164 catga 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1065
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1055
Effective search space: 685750
Effective search space used: 685750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
