Query= MSMg01no326_n22.b1 MSMg01no326_n22.b1 CHROMAT_FILE:
MSMg01no326_n22.b1 PHD_FILE: MSMg01no326_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:39 2005
(682 letters)
>mm_chr14_39931249_39932330
Length = 1082
Score = 1210 bits (626), Expect = 0.0
Identities = 665/678 (98%)
Strand = Plus / Minus
Query: 5 gaattccagaagaaccccgtaataaaaatgcataataataactgtctataggataacttc 64
|||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 747 gaattccagaagaaacctgtaataaaaatgcataataataactgtctaaaggataacttc 688
Query: 65 tttatcataatggaaaattgatgagaatggcaacaggagctcagaaacagcctttgctaa 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 687 tttatcataatggaaaattgataagaatggcaacaggagctcagaaacagcctttgctaa 628
Query: 125 aaggtatcctgccgtggttccaaaccttaactaagagcaggaagatatcctcatgtctca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aaggtatcctgccgtggttccaaaccttaactaagagcaggaagatatcctcatgtctca 568
Query: 185 ctcacagttcattttgcctgtcttatacactttgtgtcaattcctgcctcactcagcatt 244
||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 567 ctcacccttcattttgcctgtcttatacactttgtgtcaattcccgcctcactcagcatt 508
Query: 245 ggcataatgattactcaaggatatatgtctaaaaagcaattgatgcctaacctgtttcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ggcataatgattactcaaggatatatgtctaaaaagcaattgatgcctaacctgtttcaa 448
Query: 305 ttcactgctatgcttggggcactaagctaagcccttacctacattttctagtggcctaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttcactgctatgcttggggcactaagctaagcccttacctacattttctagtggcctaga 388
Query: 365 tttcaagaccaaggatcatagagagggtagacccatctgtacccaacaggagaaaattac 424
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tttcaagagcaaggatcatagagagggtagacccatctgtacccaacaggagaaaattac 328
Query: 425 ctatgagttaatgacaatgattaacaggtgagccacttttgagtccacattgtaggacag 484
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctacgagttaatgacaatgattaacaggtgagccacttttgagtccacattgtaggacag 268
Query: 485 gaacagagagaatgtgagacagattaaccaagactgcttaattatgcatgcccctccccc 544
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 267 gaacagagagaatgtgagacagattaaacaagactgcttaattatgcatgcccctccccc 208
Query: 545 acttgcaggaggcaagccccagtgtgggattcttctttcctgtaggttcttcttgaagca 604
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 207 acttgcagggggcaagccccagtgtgggattcttctttcctgtaggttcttcttgaaaca 148
Query: 605 gcggtggaggaaaagcttcggatgagggtaggactttgtcaagatatttagagttgctgt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gcggtggaggaaaagcttcggatgagggtaggactttgtcaagatatttagagttgctgt 88
Query: 665 ataataaaaggtttactt 682
||||||||||| ||||||
Sbjct: 87 ataataaaaggattactt 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_n22.g1 MSMg01no326_n22.g1 CHROMAT_FILE:
MSMg01no326_n22.g1 PHD_FILE: MSMg01no326_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:39 2005
(651 letters)
>mm_chr14_39768457_39769506
Length = 1050
Score = 1212 bits (627), Expect = 0.0
Identities = 645/651 (99%), Gaps = 1/651 (0%)
Strand = Plus / Plus
Query: 1 ttggttactttactggagttgctttattaacacatctaagaggtaccacataggctaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggttactttactggagttgctttattaacacatctaagaggtaccacataggctaaaa 260
Query: 61 acttcactgctgcacatgtctgagtctgcttgactgtcttctttcacatgcatgcaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttcactgctgcacatgtctgagtctgcttgactgtcttctttcacatgcatgcaaaca 320
Query: 121 gtcggcagacagatgctaaatcacaggcctttcaggaaacatgaaataatatgaatagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcggcagacagatgctaaatcacaggcctttcaggaaacatgaaataatatgaatagag 380
Query: 181 tggaaaaccttgaagcatatatatgaaagactggattgttcactctatgactacatagaa 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaaaaccttggagcatatatatgaaagactggattgttcactctatgactacatagaa 440
Query: 241 acctattccctcaaaggagaagatctcttcaaaatgtagtggtatgtgataaagggagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctattccctcaaaggagaagatctcttcaaaatgtagtggtatgtgataaagggagat 500
Query: 301 gcagttagcctactgtatataagttattcagtactcattagcacccggccaagacaaaac 360
||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 501 gcagttagcctactgtatataagttattcagtactcattagtatctggccaagacaaaac 560
Query: 361 caagttaaacagaaataatttaaccagaggaacacagttaacttgcataagtggtgaaat 420
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 561 caagttaaacagaaataatttaaccaaaggaacacagt-aacttgcataagtggtgaaat 619
Query: 421 tttcatttttctaaacatctcaatccatatttgtaatttgggaaggtgatttgtggctct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttcatttttctaaacatctcaatccatatttgtaatttgggaaggtgatttgtggctct 679
Query: 481 caattcttgtagggaagaaattcattggcttgaccctaggctgattggagaatagttagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 caattcttgtagggaagaaattcattggcttgaccctaggctgattggagaatagttagt 739
Query: 541 gatttctgtaccatttacactcatgcttcagtcatccaaagaaactcttttccagttctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gatttctgtaccatttacactcatgcttcagtcatccaaagaaactcttttccagttctt 799
Query: 601 agtcactattttttcttaaagtaaaaatatatagagattatattttgaaat 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 agtcactattttttcttaaagtaaaaatatatagagattatattttgaaat 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1050
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1040
Effective search space: 666640
Effective search space used: 666640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
