Query= MSMg01no326_p22.b1 MSMg01no326_p22.b1 CHROMAT_FILE:
MSMg01no326_p22.b1 PHD_FILE: MSMg01no326_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:48 2005
(629 letters)
>mm_chr14_56980139_56981167
Length = 1029
Score = 1162 bits (601), Expect = 0.0
Identities = 619/625 (99%)
Strand = Plus / Plus
Query: 5 gaattcagagccagcccaagatacatgaatttgctgatgttgtttttttaaaaaataaat 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagccagcctaagatacatgaatttgctgatgttgtttttttaaaaaataaat 264
Query: 65 agcaataacaaataacaacacagacacacagagacacacacatcacatgcatacatgcaa 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 agcaataacaaataacaacacagacacacagagacacacacatcacatgcatacatacaa 324
Query: 125 aaacaaaacccaaaaccaagtggcagagaataaacaacactaagtaacctactgtgtgct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaacaaaacccaaaaccaagtggcagagaataaacaacactaagtaacctactgtgtgct 384
Query: 185 aggagcactatatttcagggattctatctgggggcagggggggagtacgcccagttataa 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 385 aggagcactatatttcagggattctatctgggggcagggggggagtacgcccagttgtaa 444
Query: 245 gcctgttggctccactgaacccctaacagcctctgactgcttctgctaaagccactgctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcctgttggctccactgaacccctaacagcctctgactgcttctgctaaagccactgctt 504
Query: 305 gctctggcctcagtctttagcagctccaagcaggacagtgctgaagtctacgaaccagtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gctctggcctcagtctttagcagctccaagcaggacagtgctgaagtctacgaaccagtt 564
Query: 365 tctgagcgccaccctacttccctggcaggatgtacatgtgccagtcttggcatttcctat 424
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctgagcggcagcctacttccctggcaggatgtacatgtgccagtcttggcatttcctat 624
Query: 425 catgaggaaatgaggaaacaatatagaggtttattaggctgcagctttgttttgcttttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 catgaggaaatgaggaaacaatatagaggtttattaggctgcagctttgttttgcttttg 684
Query: 485 ttgtttccattctcatctcaatgcctgacagtgctgctcagcagagaaatgcttgcctgg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttgtttccattctcatctcaatgcctgacagtgctgctcagcagagaaatgcttgcctgg 744
Query: 545 ccatagcctggcacactgagcagatgcaggtgtgtggtgagggtttgggtggggtcagtc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ccatagcctggcacactgagcagatgcaggtgtgtggtgagggtttgggtggggtcagtc 804
Query: 605 cactgtgtacgagaggaatccagag 629
||||||||| |||||||||||||||
Sbjct: 805 cactgtgtaggagaggaatccagag 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_p22.g1 MSMg01no326_p22.g1 CHROMAT_FILE:
MSMg01no326_p22.g1 PHD_FILE: MSMg01no326_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:48 2005
(668 letters)
>mm_chr14_57146641_57147708
Length = 1068
Score = 685 bits (354), Expect = 0.0
Identities = 381/390 (97%), Gaps = 1/390 (0%)
Strand = Plus / Minus
Query: 1 attgtgaatgtcccatagatatatgaccaacaatccacttggtgttaattgttcaaagta 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 attgtgaatgtcctatagatatatgaccaacaatccacttggtgttaattgttcaaagta 330
Query: 61 ctcaagcagtcttcaatttagtgaaaaagagccatctcagctttcccccagggaaactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctcaagcagtcttcaatttagtgaaaaagagccatctcagctttcccccagggaaactga 270
Query: 121 atagctaaatttaaacatgatggccagttttgagctgggcatggtgacatacatgagctt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 269 atagctaaatttaaacatgatggccagttttgagctgggcatggtgacatacatgagc-t 211
Query: 181 tttttttttttattaacttatttattcactttacattccagtatcagcactccttctcct 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttttttttttcattaacttatttattcactttacattccagtatcagcactccttctcct 151
Query: 241 cccagtccccacccacacaaatcttcccccactccccccatttctcctgagaaggggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 150 cccagtccccacccacacaaatcttcccccactccccccatttctcctgagaagggggtt 91
Query: 301 gcagaactaggtgcatcctctcctactgaagccagacagggcgcctcacgacaacaggat 360
||||||||||||||||||||||||||||||||||||||||| | || | |||||||||||
Sbjct: 90 gcagaactaggtgcatcctctcctactgaagccagacagggtggcttaggacaacaggat 31
Query: 361 cagcaggcaggcaggcaggcaccaaattaa 390
||||||| ||||||||||||||||||||||
Sbjct: 30 cagcaggaaggcaggcaggcaccaaattaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
