Query= MSMg01no327_c04.b1 MSMg01no327_c04.b1 CHROMAT_FILE:
MSMg01no327_c04.b1 PHD_FILE: MSMg01no327_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:58 2005
(149 letters)
>mm_chr14_100634803_100635351
Length = 549
Score = 250 bits (129), Expect = 4e-71
Identities = 135/137 (98%)
Strand = Plus / Minus
Query: 2 atgtggtcacagtgtcacagcaagtgctcctggtctggtgtaagcagggcactgtggcag 61
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 338 atgtggtcacagtgtcacagcaagtgctcctgggctggtgtaagcagggcactgtggcag 279
Query: 62 tgtctgttggagtgctggtcctttgcactgctgtgagaagacactctggattgtctattt 121
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 278 tgtctgttggagtgctggtcctttgcactgctgtgagaagacactctggactgtctattt 219
Query: 122 gttggtttgttgtggtg 138
|||||||||||||||||
Sbjct: 218 gttggtttgttgtggtg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no327_c04.g1 MSMg01no327_c04.g1 CHROMAT_FILE:
MSMg01no327_c04.g1 PHD_FILE: MSMg01no327_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:58 2005
(248 letters)
>mm_chr14_100468891_100469541
Length = 651
Score = 429 bits (222), Expect = e-125
Identities = 243/252 (96%), Gaps = 5/252 (1%)
Strand = Plus / Plus
Query: 1 ctgtccccattttacagaacccagagaaaaggaactgcatcagaggttggtaatgagatg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 ctgtccccattttacagaacccagagaaacggaactgcatcagaggttggtaatgagatg 260
Query: 61 ctgtcacagctgaagagggctgaccaagttagcaggataaaaagcaggtg----gggggg 116
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ctgtcacagctgaagagggctgaccaagttagcaggataaaaagcaggtgtggggggggg 320
Query: 117 gggttcctggtagatccctttctttcatctttctagccgaatctgggtaagtctatgggc 176
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 321 gggttcctggtagatccctttctttcatctttctagccgaatctggc-aagtccatgggc 379
Query: 177 cggggactggaaaaccttttgttgttgctgttgctgttgtagaaaggaggcaaagaaaga 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggggactggaaaaccttttgttgttgctgttgctgttgtagaaaggaggcaaagaaaga 439
Query: 237 ataatgcagaga 248
||||||||||||
Sbjct: 440 ataatgcagaga 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 651
Length adjustment: 9
Effective length of query: 239
Effective length of database: 642
Effective search space: 153438
Effective search space used: 153438
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
