Query= MSMg01no327_e05.b1 MSMg01no327_e05.b1 CHROMAT_FILE:
MSMg01no327_e05.b1 PHD_FILE: MSMg01no327_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:08 2005
(597 letters)
>mm_chr14_74352768_74353764
Length = 997
Score = 1083 bits (560), Expect = 0.0
Identities = 584/592 (98%)
Strand = Plus / Plus
Query: 6 gaattctacttattacgtgcttgatttcagaggaaatgtttattggactaatacaagacc 65
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctacttaaaatgtgcttgatttcagaggaaatgtttattggactaatacaagacc 265
Query: 66 caaatttagtaagactttgattttgtggctattaaaaattctttatgtaagaaaatcaaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caaatttagtaagactttgattttgtggctattaaaaattctttatgtaagaaaatcaaa 325
Query: 126 ttgcaaggaaacaagaaattacctggtacataattggtaaacacttacatgcacacacat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttgcaaggaaacaagaaattacctggtacataattggtaaacacttacatgcacacacat 385
Query: 186 acacacttttttggctttgtcctggggacatcacttctaccacttggccatgtatactag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acacacttttttggctttgtcctggggacatcacttctaccacttggccatgtatactag 445
Query: 246 tatttctcacttttcttaatgctgggactctttctttaatacagttcctcatggtatggt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tatttctcacttttcttaatgctgggactctttctttaatacagttcctcatggtatggt 505
Query: 306 gatctacaaccataaaattattttcattactacttcataactgtaattttactactgtta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gatctacaaccataaaattattttcattactacttcataactgtaattttactactgtta 565
Query: 366 tgagcaacaacgcaaatatctatgcctttgatggtcttagatggtgacaccagtcaccta 425
|||| || || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgagtaataatgtaaatatctatgcctttgatggtcttagatggtgacaccagtcaccta 625
Query: 426 agagtcattttatctcccagcacggtcaccattcacagattgagaacctctggtgtacac 485
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 626 agagtcattttatctcccagcatggtcaccattcacagattgagaacctctggtgtacac 685
Query: 486 tcttatcttgccataaagagaactggttttttagagtggtagagcatgcctttaatccca 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tcttatcttgccataaagagaactggttttttagagtggtagagcatgcctttaatccca 745
Query: 546 gcactcgggaggcagaggcaggtggatttctgagttcgaggccagcctggtc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gcactcgggaggcagaggcaggtggatttctgagttcgaggccagcctggtc 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_e05.g1 MSMg01no327_e05.g1 CHROMAT_FILE:
MSMg01no327_e05.g1 PHD_FILE: MSMg01no327_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:08 2005
(223 letters)
>mm_chr14_74552555_74553172
Length = 618
Score = 304 bits (157), Expect = 3e-87
Identities = 201/228 (88%), Gaps = 21/228 (9%)
Strand = Plus / Minus
Query: 1 ctaaacacatatgacctaaaacattaaaataagaaactctagacaatgtgaaaacaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 334 ctaaacacatatgacctaaaacattaaaataagaaactctagacaatgtaaaaacaccca 275
Query: 61 aagcaagaaacaaaacaagattctctccacaaagaaaagctatgggcaggtcacattcac 120
|||||||||| || ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 274 aagcaagaaataa-----gattctctccacaaagaaaagttatgggcaggtcacattcac 220
Query: 121 tgctgaatttcaaccattttttttttgtgtgtggggggggggg-----ggattacactga 175
||||||||||||||||||| ||||||| ||||| ||||||||||||
Sbjct: 219 tgctgaatttcaaccattt-----------gtgggggtgggggagaaaggattacactga 171
Query: 176 naattctgaaagcccttaaattctttctacaaaggtaaaatgaacaca 223
|||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 170 taattctgaaagcccttaaattctttctacaaaggtagaatgaacaca 123
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 618
Length adjustment: 9
Effective length of query: 214
Effective length of database: 609
Effective search space: 130326
Effective search space used: 130326
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
