Query= MSMg01no327_j21.b1 MSMg01no327_j21.b1 CHROMAT_FILE:
MSMg01no327_j21.b1 PHD_FILE: MSMg01no327_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:33 2005
(627 letters)
>mm_chr14_69887771_69888797
Length = 1027
Score = 1133 bits (586), Expect = 0.0
Identities = 614/630 (97%), Gaps = 12/630 (1%)
Strand = Plus / Minus
Query: 4 ggaattctctgtcagaccctggacatcaaaagttcttgcaaagctgggctgttctcagga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ggaattctctgtcagaccctggacatcaaaagttcttgcaaagctgggctgttctcagga 768
Query: 64 gctactgtgcaattgagaacagatgtctgctctcagagcagcttggatgaagggaccagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gctactgtgcaattgagaacagatgtctgctctcagagcagcttggatgaagggaccagg 708
Query: 124 aagcactgggcaggactttttcatcctggagggagggacttcaaagaagcgaagagaagc 183
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aagcactgggcagggctttttcatcctggagggagggacttcaaagaagcgaagagaagc 648
Query: 184 ctgtgtttacttgcaggtgcaaggtgaccagggatgcattgactgagcagcaagtatgac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 ctgtgtttacttgcaggtgcaaggtgaccagggatgcattgactgagcagcaagtatgac 588
Query: 244 ttgaactcatggcctctctgtgccttggaacactgtgacttctaggttctctgaatacac 303
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 587 ttgaactcatggcctctctgtgccttgggacactgtgacttctaggttctctgaatacac 528
Query: 304 ttggccacaaatgtagacttctagccagagccattctgcctcaagaagaaagctgggagg 363
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 527 ttggccacaaatgtagacttctagccagagccattctacctcaagaagaaagctgggagg 468
Query: 364 caggactgc------tccccccgcattctgggaggggagccaactgctctcgtcccattt 417
||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 467 caggactgcttgtagt------gcattctgggaggggagccaactgctctcgtcccattt 414
Query: 418 tgggcctgccttgtccctgaattccaaagtgcccgcctcgaagttgcagtttattttgtc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tgggcctgccttgtccctgaattccaaagtgcccgcctcgaagttgcagtttattttgtc 354
Query: 478 cacttgaagtcacccttcaagattgcagacccttcatttaagcctctcccagagtgttga 537
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cacttgaagtcacccttcacgattgcagacccttcatttaagcctctcccagagtgttga 294
Query: 538 atgactctagccccgccctggaaccaggggcagaaagtcccagaggtttctggatgggct 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atgactctagccccgccctggaaccaggggcagaaagtcccagaggtttctggatgggct 234
Query: 598 ctgtttacaactctctgactctttcctgct 627
||||||||||||||||||||||||||||||
Sbjct: 233 ctgtttacaactctctgactctttcctgct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_j21.g1 MSMg01no327_j21.g1 CHROMAT_FILE:
MSMg01no327_j21.g1 PHD_FILE: MSMg01no327_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:33 2005
(633 letters)
>mm_chr14_69833951_69834983
Length = 1033
Score = 1201 bits (621), Expect = 0.0
Identities = 630/633 (99%)
Strand = Plus / Plus
Query: 1 aaggtctggctgcatagagaaggtagcctgggctacaggtgatagactctcaaaggcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggtctggctgcatagagaaggtagcctgggctacaggtgatagactctcaaaggcaaa 260
Query: 61 agcaaacagagaccgagagctgatgtagggcggatgggacaccaagtagttgtgtgcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcaaacagagaccgagagctgatgtagggcggatgggacaccaagtagttgtgtgcctt 320
Query: 121 gcttccagcctgtttgtgctaatggagaagatggattttgggtccctgtgtgtctccccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttccagcctgtttgtgctaatggagaagatggattttgggtccctgtgtgtctccccc 380
Query: 181 tgtcctttcctcctccctaccttgacaagaagggggagtttcattttgttttcccagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcctttcctcctccctaccttgacaagaagggggagtttcattttgttttcccagaga 440
Query: 241 agtcttggctcattaacaatctagtcattaggaatgaaaggaacaagaagaaattttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcttggctcattaacaatctagtcattaggaatgaaaggaacaagaagaaattttcaa 500
Query: 301 tggacagaggctggcagctgtcccagccaatctctcatcaccttgtcacgccacctcatt 360
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 501 tggacagaggctggcagctgtcccagccaatctctcatcaccttgtcatgtcacctcatt 560
Query: 361 gtcttcgatgtgagagcaggctatgtcagcaatccacatgaccacacagggcaactggaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 gtcttcgatgtgagagcaggctatgtcagcaatccacatgaccacacagggcaactggga 620
Query: 421 agaaccaggctgaaaaacatgcaaagcttggaaagtatcaagctgtgtaaagacagacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaccaggctgaaaaacatgcaaagcttggaaagtatcaagctgtgtaaagacagacac 680
Query: 481 tcctgtcaatatgaaattgctgtttcaagagcctcgggagaaatacgtttcagtaagagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcctgtcaatatgaaattgctgtttcaagagcctcgggagaaatacgtttcagtaagagt 740
Query: 541 ccttcacctaccagagaacttgcaaccaaatcaggaggggattattataacacttgcctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccttcacctaccagagaacttgcaaccaaatcaggaggggattattataacacttgcctt 800
Query: 601 gcatactcaagggccaggcttctatctgcagca 633
|||||||||||||||||||||||||||||||||
Sbjct: 801 gcatactcaagggccaggcttctatctgcagca 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
