Query= MSMg01no328_e18.b1 MSMg01no328_e18.b1 CHROMAT_FILE:
MSMg01no328_e18.b1 PHD_FILE: MSMg01no328_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:25 2005
(670 letters)
>mm_chr14_101452059_101453130
Length = 1072
Score = 627 bits (324), Expect = 0.0
Identities = 334/338 (98%), Gaps = 2/338 (0%)
Strand = Plus / Minus
Query: 335 tacgtacatgtatgctttctcaaatgtatgtcttttcaccacctctgttcttggtaccat 394
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1072 tacgtacatgtatgctttctcaaatgtatgtcttttcactacctctgttcttggtaccat 1013
Query: 395 tgggagccaaaagagggcatagcattcccttggactgctcttacaggtgactgtgagttg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 tgggagccaaaagagggcatagcattcccttggactgctcttacaggtgactgtgagttg 953
Query: 455 ccatgtaggttctgggaaccaaatgagggtcctatggcagagcagtgtgtgctgctaact 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 ccatgtaggttctgggaaccaaatgagggtcctatggcagagcagtgtgtgctgctaact 893
Query: 515 gctacatcatctctctagcctgccttccatttccaagctttgattcttctactgacattt 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 gctacatcatctctctagcctgccttccatttccaagctttgattcttctactgacattt 833
Query: 575 ggaaaagatagggcaggaaattacctggttgaatggattttttttttttt--acttagat 632
|||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 832 ggaaaagatagggcaggaaattacctggctgaatggatttttttttttttttacttagat 773
Query: 633 tcgcttatggtaaacaaaagcatctgtaattcaacctg 670
||||||||||||||||||||||||||||||||||||||
Sbjct: 772 tcgcttatggtaaacaaaagcatctgtaattcaacctg 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1072
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1062
Effective search space: 700920
Effective search space used: 700920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_e18.g1 MSMg01no328_e18.g1 CHROMAT_FILE:
MSMg01no328_e18.g1 PHD_FILE: MSMg01no328_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:25 2005
(616 letters)
>mm_chr14_101322662_101323676
Length = 1015
Score = 1106 bits (572), Expect = 0.0
Identities = 605/616 (98%), Gaps = 1/616 (0%)
Strand = Plus / Plus
Query: 1 tctggaaagaatcctaaagactaatttttccgccctgccagatgccccactcttctgcaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggaaagaatcctaaaggctaatttttccgccctgccagatgccccactcttctgcaa 260
Query: 61 tctagtcacagtgagtattatggataatcacaatggaggtttaaaaagctagacagctac 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 tctagtcacagtgagtattatggataatcacaatggaggattaaaaagctagacagctac 320
Query: 121 ctcccaagattttaaatacatctgcatggcaagcatttctgtcagactgttgagaaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcccaagattttaaatacatctgcatggcaagcatttctgtcagactgttgagaaataa 380
Query: 181 tgaccaggagataagaaggaagtctataggaggtgacagacaaatatttttacaatcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaccaggagataagaaggaagtctataggaggtgacagacaaatatttttacaatcttg 440
Query: 241 gaagtcagaatattcagggatgtagagagctgactcattctctttatgttgcccccagag 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 gaagtcagaatattcagggatgtagagagctgactcactctctttatgttgcccccagag 500
Query: 301 ccagaaggtgggaagatgcttttatcttacgtcattgcaggacaccgattctgtccatgc 360
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ccaga-ggtgggaagatgcttttatcttacgtcattgcaggacagtgattctgtccatgc 559
Query: 361 ctaggccaggatgcctaacaggatgcctaggccattatctagctagcatcctgttagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 560 ctaggccaggatgcctaacaggatgcctaggccattatctagctagcatcctgttaggaa 619
Query: 421 tgcacatgtactggctcttacaccagggctgtaaagtagaagttctagacaggagtccaa 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgcacatgtactgggtcttacaccagggctgtaaagtagaagttctagacaggagtccaa 679
Query: 481 taccctgtaccaaatgtcaggcaccttcatgatacaccatttctcgctgatcctgacaga 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 680 taccctgtaccaaatgtcaggcaccttcgtgatacaccatttctcgctgatcctgacaga 739
Query: 541 cctgccaaaacttccctcccatttctggaatgttcctccaacctgctggttctgacttca 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 740 cctgccaaaacttccctcccatttctggaatgttcctccaacctgatggttctgacttca 799
Query: 601 ggctttgctcctggag 616
|||||||||| |||||
Sbjct: 800 ggctttgctcttggag 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1015
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1005
Effective search space: 609030
Effective search space used: 609030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
