Query= MSMg01no328_j23.b1 MSMg01no328_j23.b1 CHROMAT_FILE:
MSMg01no328_j23.b1 PHD_FILE: MSMg01no328_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:49 2005
(229 letters)
>mm_chr14_123199023_123199652
Length = 630
Score = 422 bits (218), Expect = e-122
Identities = 227/230 (98%), Gaps = 1/230 (0%)
Strand = Plus / Minus
Query: 1 tattatacagagaaacctgtcttg-aaaaaaacaaaacaaaaataaattaaaaaccagct 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 430 tattatacagagaaacctgtcttgaaaaaaaacaaaacaaaaataaattaaaaaccagct 371
Query: 60 tgttataatttattattgaatgctagctgttgacaaatgactttgccttgggacaagctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 370 tgttataatttattattgaatgctagctgttgacaaatgactttgccttgggacaagttt 311
Query: 120 gtctgtaaactgcctgagccacatcaggtgttctcatctggtaggggacatcaatgcacc 179
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 310 gtctgtaaactgcctgagccacatcaggtgttctcatctgggaggggacatcaatgcacc 251
Query: 180 atcattctgcatctccctgccctacaagaagggctccactcattcccagg 229
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atcattctgcatctccctgccctacaagaagggctccactcattcccagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 630
Length adjustment: 9
Effective length of query: 220
Effective length of database: 621
Effective search space: 136620
Effective search space used: 136620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no328_j23.g1 MSMg01no328_j23.g1 CHROMAT_FILE:
MSMg01no328_j23.g1 PHD_FILE: MSMg01no328_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:49 2005
(582 letters)
>mm_chr14_123007195_123008176
Length = 982
Score = 1087 bits (562), Expect = 0.0
Identities = 577/582 (99%)
Strand = Plus / Plus
Query: 1 cagataggaacatgcctacaattcctccctggtataaaactgaatagttcatttgctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagataggaacatgcctacaattcctccctggtataaaactgaatagttcatttgctttt 260
Query: 61 cagttaaaacacaacaacaacatcaacaacaaaatagaaacaaataccatcttacagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagttaaaacacaacaacaacatcaacaacaaaatagaaacaaataccatcttacagtgt 320
Query: 121 ggtggtttaggaagcagaggctggaaggttgtacacaggtctttgaggggtagcctggtc 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 ggtggtttaggaagcagaggctggaaggttgtacacaggtctttgaagggtagcctggtc 380
Query: 181 tatattgctctagatgatccagggatacaaaaacagaaacaaaaacaagctcaaaaccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatattgctctagatgatccagggatacaaaaacagaaacaaaaacaagctcaaaaccca 440
Query: 241 aaaccaaaccagaccatctccctaaagactgagtaatgctgcagagaagacgagaagtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaccaaaccagaccatctccctaaagactgagtaatgctgcagagaagacgagaagtga 500
Query: 301 ccttgctggaaacaggaactgttttcacgtgccttctctaatctcttcgcaggttgcatt 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ccttgctggaaacaggaactgttttcacgtgccttctctaatctctttgcaggttgcatt 560
Query: 361 taccacactcaagcacaagctcaaatcaagtgctgtgactggagcttgatggcatacagc 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 taccacactcaagcacaagctcaaatcaagtgctgtgactggaacttgatggcatacagc 620
Query: 421 tcttacatcagtatacagcatgatagagcttgctgcctgataataaagtggagatggtaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcttacatcagtatacagcatgatagagcttgctgcctgataataaagtggagatggtaa 680
Query: 481 aagggagaggaggacaggttctccactgttcattgttcttacatggtggacaccatgtag 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 aagggagaggaggacaggttctccactgttcattgttcttacatagtggacaccatgtag 740
Query: 541 cttcttgaagcctgttccctgcttgcagcaaaggtgactagt 582
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 741 cttcttgaagcctgttccctgtttgcagcaaaggtgactagt 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
