Query= MSMg01no329_c19.b1 MSMg01no329_c19.b1 CHROMAT_FILE:
MSMg01no329_c19.b1 PHD_FILE: MSMg01no329_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:32 2005
(464 letters)
>mm_chr14_88838555_88839418
Length = 864
Score = 528 bits (273), Expect = e-154
Identities = 307/321 (95%), Gaps = 7/321 (2%)
Strand = Plus / Minus
Query: 5 gaattcagtctattttcccc---gctattggttgatttccaaatactaatatatactaaa 61
|||||||| |||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 616 gaattcagactattt---ccaaggctattggttgatttccaaatactaatatatactaaa 560
Query: 62 aaagacctactgctgaagaaaaaaacctacacatctcaaaaatcacatgctgcatgtttc 121
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gaagacttactgctgaag-aaaaaacctacacatctcaaaaatcacatgctgcatgtttc 501
Query: 122 tctaatgtttagatgctttcttagaaactttatatatgtatattttagatatggatatga 181
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctaatgtttagatgttttcttagaaactttatatatgtatattttagatatggatatga 441
Query: 182 aatagccgtagaagtaaagaaatcagtaaaggtccatagtgttgtttgagaaaaagaatt 241
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 440 aatagccatagaagtaaagaaatcagtaaaggtccatagtgttgtttgagaaaaaggatt 381
Query: 242 gaatgtagtgacatcaaggagttaagaggaattaatgaaacagaaaggattaagtgagtt 301
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 380 gaatgtagtgacatcaaggagttaagaggaattaatgaaacggaaaggattaagtgagtt 321
Query: 302 gtgggttgaaagagaagagta 322
|||||||||||||||||||||
Sbjct: 320 gtgggttgaaagagaagagta 300
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_c19.g1 MSMg01no329_c19.g1 CHROMAT_FILE:
MSMg01no329_c19.g1 PHD_FILE: MSMg01no329_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:32 2005
(580 letters)
>mm_chr14_88678631_88679610
Length = 980
Score = 1106 bits (572), Expect = 0.0
Identities = 578/580 (99%)
Strand = Plus / Plus
Query: 1 actgggactctttggagattccaggctgaaggccataggctgaggtgcacctttggttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgggactctttggagattccaggctgaaggccataggctgaggtgcacctttggttcc 260
Query: 61 cctggatgtgaagctgcccattctttggactgagcagatagagtgttctcttctctgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctggatgtgaagctgcccattctttggactgagcagatagagtgttctcttctctgcag 320
Query: 121 actgccactgctgacctacccagaatccagtcatgtaaaccaattaaaaattctccaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgccactgctgacctacccagaatccagtcatgtaaaccaattaaaaattctccaaaa 380
Query: 181 ataaatatatcacctcaggtctcgtcttttaaggaatcccggtgagaaacagaaagcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaatatatcacctcaggtctcgtcttttaaggaatcccggtgagaaacagaaagcaaa 440
Query: 241 gaaccgtttggtagaaacagtaaaaatatccttgaaatctattgatatggacaagagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaccgtttggtagaaacagtaaaaatatccttgaaatctattgatatggacaagagaaa 500
Query: 301 attgtgcccttaaagaagattaccacttagtgatttgagttctagacacgctagtaaggt 360
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 501 attgtgcccttaaagaagattaccacttagtgatttgagttctagacatgttagtaaggt 560
Query: 361 acaggcaataggaatgctaatggattagagaagaaataaagaggggaacagaacacaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaggcaataggaatgctaatggattagagaagaaataaagaggggaacagaacacaaga 620
Query: 421 aaacaccaaaatatacccgagaaatagctgaataaggatgccatgactcattccagataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaacaccaaaatatacccgagaaatagctgaataaggatgccatgactcattccagataa 680
Query: 481 gaatgagcaggcttcgaatggaagattggaatgttgttgctgaacacattaagtttacga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaatgagcaggcttcgaatggaagattggaatgttgttgctgaacacattaagtttacga 740
Query: 541 ttttgaataactaataataattaagttagaagatatttgg 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttttgaataactaataataattaagttagaagatatttgg 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
