TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCACACAAGCTGTCCTTCCTCCATCTTCCAAGTTAGAATGCAAGTG
GAAGAGATGTATGCAAATTGTAGCAAAAGGAGCAGAATGTCATTAGGGAC
AAAGCTTTCCCATGATAAGAAACCCTAACTGTAAATTCATCCCTTTCTAA
GTTAATTTAGTGACTAGGAGAACAGGCATGCACTGTAGAAAGTCACAGCA
AACTTCAAAGATGAACATGAAATACTGTGTAGCTCTCATTCTGGAGATAT
GAACTGGGCGTTGATGGATAGGCAGATTTTTATCTGATACATTTTCTCTC
TCATTTTGAACTATTCATTTTATCCTTCTCTTTACAAAGAGGCAAGTCAA
GAGCTTATCCAGGTTGTAAATCTGGTCCAAAGTCATGAATTTCCAGGTCA
TTCTCATCCCTCTGCATAATGTTTGTCTATAACATTTCCACATAAAAAAT
GCAAATCAACTGTCCACAGGATTAGTGAAGACAGGCTTTGGAAAGACAAC
CTCCTTTATAGTGGACAAAGTTCCTTGGAGATTTTCTTTCTTTCCTGCCT
ACACATGAAAGAGGTAAAGGTGGAAATATGTTTTTTTATTATTATTATTA
GATATCAGGAGTTATTTTAAAGTCATGGAGTAACGATATAATTGCATTAA
TCATCGCAGAAGAAGGTCAGACATACCGACTACCATCACCTATAGAAATA
TACCAGAAGATAG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAAGGCCCATACCTAAACATGATAAAA
GCAATCCACAGCAAACCTGCAGCCAACATCAAAGTAAAAGGTGAGAAGCT
AGAAGCAATCCCACTAAAATCAGGGAGTAGATAAGGCTGCCCATTTTCTC
CCTACCTATTCAACATTGTACTTGAAGTCCTATCCAGAGCAGGAGACGCA
AAGGAGAGAAGGGGATACATTGGAAGGAAGAGTCAAATACACTTTGGCAA
GGAAAGATACCTTTTTAGCGACCTAATATTCACTATATAATGGAGGCTCG
AAAATTTCCCTTAAAAACATCTATCCCAAAAATTCCTGATCTACAGTCTT
CAGAAAAGAAGCTGCGATTTAAAATTACTTCAAAAAAAGCAAGGTTTTTC
CCTTTCCCCAACAAAAAACTTTTTTCGGTCTCGGAATTTGGGAAAAATAA
AAATATTTCCCATTTCCCCCAATTTCCCAAAAAAAACTTAACTTATACTG
TCAATTNCTTCATAAAGGAAGTTTTTNNNNNTTTGGGTTCTTTTTCCGAA
TCGAGGACNNNNNNNNNNNNTTNCNNCCGCTAAGAGGGAAAAAAAAGTGG
GGGGGGTTGAGGTAGATCGNGCCGCCCCCTCTTCCAAAATCTTCGAAAAA
AAAATCTCAAACCGGCCTCCCTAAAAAAAGGGGGAACAACGAAAACCCAT
CCCTCCTTTCCCAACCACTCCCCTTTTATCCACATTCCTCCCCTTTTTAA
AAGTGGATGAGTGGGACTGTTATNTCCCCNTTTNTTATTCTCTACCTNCT
TCCCTCCTTTAATTGGCATGGATCTGTACGGG

Query= MSMg01no329_l23.b1 MSMg01no329_l23.b1 CHROMAT_FILE:
MSMg01no329_l23.b1 PHD_FILE: MSMg01no329_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:19 2005
         (628 letters)



>mm_chr14_37047819_37048844
          Length = 1026

 Score = 1172 bits (606), Expect = 0.0
 Identities = 619/624 (99%), Gaps = 2/624 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccacacaagctgtccttcctccatcttccaagttagaatgcaagtggaagagatg 64
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacacaagctgttcttcctccatcttccaagttagaatgcaagtggaagagatg 264

                                                                       
Query: 65  tatgcaaattgtagcaaaaggagcagaatgtcattagggacaaagctttcccatgataag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatgcaaattgtagcaaaaggagcagaatgtcattagggacaaagctttcccatgataag 324

                                                                       
Query: 125 aaaccctaactgtaaattcatccctttctaagttaatttagtgactaggagaacaggcat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaccctaactgtaaattcatccctttctaagttaatttagtgactaggagaacaggcat 384

                                                                       
Query: 185 gcactgtagaaagtcacagcaaacttcaaagatgaacatgaaatactgtgtagctctcat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcactgtagaaagtcacagcaaacttcaaagatgaacatgaaatactgtgtagctctcat 444

                                                                       
Query: 245 tctggagatatgaactgggcgttgatggataggcagatttttatctgatacattttctct 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 445 tctggagatatgaactgggcgttgatggataggcagatttttatctgatacattttttct 504

                                                                       
Query: 305 ctcattttgaactattcattttatccttctctttacaaagaggcaagtcaagagcttatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctcattttgaactattcattttatccttctctttacaaagaggcaagtcaagagcttatc 564

                                                                       
Query: 365 caggttgtaaatctggtccaaagtcatgaatttccaggtcattctcatccctctgcataa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caggttgtaaatctggtccaaagtcatgaatttccaggtcattctcatccctctgcataa 624

                                                                       
Query: 425 tgtttgtctataacatttccacataaaaaatgcaaatcaactgtccacaggattagtgaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgtttgtctataacatttccacataaaaaatgcaaatcaactgtccacaggattagtgaa 684

                                                                       
Query: 485 gacaggctttggaaagacaacctcctttatagtggacaaagttccttggagattttcttt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gacaggctttggaaagacaacctcctttatagtggacaaagttccttggagattttcttt 744

                                                                       
Query: 545 ctttcctgcctacacatgaaagaggtaaaggtggaaatatgtttttttattattattatt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||
Sbjct: 745 ctttcctgcctacacatgaaagaggtaaaggtggaaatatgttttttt--tattattttt 802

                                   
Query: 605 agatatcaggagttattttaaagt 628
           ||||||||||||||||||||||||
Sbjct: 803 agatatcaggagttattttaaagt 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1026
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1016
Effective search space:   627888
Effective search space used:   627888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)