Query= MSMg01no331_n22.b1 MSMg01no331_n22.b1 CHROMAT_FILE:
MSMg01no331_n22.b1 PHD_FILE: MSMg01no331_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:51 2005
(344 letters)
>mm_chr14_23560465_23561208
Length = 744
Score = 503 bits (260), Expect = e-147
Identities = 322/356 (90%), Gaps = 27/356 (7%)
Strand = Plus / Plus
Query: 1 tctatcttaagaaatgtcattggaggctattctgcccttccttgcctttgcctgtctaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctatcttaagaaatgtcattggaggctattctgcccttccttgcctttgcctgtctaca 260
Query: 61 ttcaagttcagatgcattatttttgttcatgcattcatttatttttattcaaaaaattat 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaagttcagatgcattatttttattcatgcattcatttatttttattcaaaaaattat 320
Query: 121 taaaatatgatatatcatttccccactttcctccctccaactcatctcatgcacacccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaatatgatatatcatttccccactttcctccctccaactcatctcatgcacacccca 380
Query: 181 aatacactctactaccactttccttcactcatttctggcctctttttgccactgttacac 240
|||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 381 aatacactctactaccactttccttcgctcattt------------tgccactgttacac 428
Query: 241 ttatatatacacacatg-------t-acacgcacgcacat----acacacacacacacat 288
||||||||||| ||| | | |||| ||| ||||| ||||||||||||||||
Sbjct: 429 ttatatatacatacacgcgcacgctcacacacacacacatgtgcacacacacacacacat 488
Query: 289 gct-cacacacatacacacatataactataacctgactgagtctgttcagtgttgc 343
| | |||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 489 g-tgcacacacatacacacacataactataacctg-ctgagtctgttcagtgttgc 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_n22.g1 MSMg01no331_n22.g1 CHROMAT_FILE:
MSMg01no331_n22.g1 PHD_FILE: MSMg01no331_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:51 2005
(364 letters)
>mm_chr14_23721866_23722629
Length = 764
Score = 681 bits (352), Expect = 0.0
Identities = 361/364 (99%)
Strand = Plus / Minus
Query: 1 gaatgcacacaagaggagggggagaacaacacatctgctagagaacacaaatggctctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaatgcacacaagaggagggggagaacaacacatctgctagagaacacaaatggctctaa 505
Query: 61 ttcatgtggtatgaaggcaatgtgctttggagaatggactccaatgtactcatcagtgac 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 504 ttcatgtggtatgaaggcaatgtgctttggggaatggactccaatgtactcatcagtgac 445
Query: 121 tattgtcagcgttatgaggtgacaacatttgtgacatgtaactgaagccaggactgccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tattgtcagcgttatgaggtgacaacatttgtgacatgtaactgaagccaggactgccct 385
Query: 181 ctgagagacaattttgtattccattcccatatagatcacccatgttgtttagtctgaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgagagacaattttgtattccattcccatatagatcacccatgttgtttagtctgaagg 325
Query: 241 gcaaggacttcatttgtcttttgaacaaactacagtagaagttccaacctagaaagtgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcaaggacttcatttgtcttttgaacaaactacagtagaagttccaacctagaaagtgag 265
Query: 301 gctgtgtatccaaggatacatagtgtatggcaatggcagaataaggaggcagttattata 360
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 264 gctgtgtatccaaggatacatagtgtatggcaatgggagaataaggaggcagttattaga 205
Query: 361 agta 364
||||
Sbjct: 204 agta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
