Query= MSMg01no332_g02.b1 MSMg01no332_g02.b1 CHROMAT_FILE:
MSMg01no332_g02.b1 PHD_FILE: MSMg01no332_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:46 2005
(459 letters)
>mm_chr14_110028183_110029041
Length = 859
Score = 826 bits (427), Expect = 0.0
Identities = 451/459 (98%), Gaps = 1/459 (0%)
Strand = Plus / Plus
Query: 1 ttttacatctctgaccatctgtctaaatgcttcaaatgaattgctttttatggacatggc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 ttttacatctctgaccatctgtctaaatgcttcaagtgaattgctttttatggacatggc 260
Query: 61 ttttgttcattgaaagattgaatagtataacttgtgaattcaggcactcacaccaatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttgttcattgaaagattgaatagtataacttgtgaattcaggcactcacaccaatatc 320
Query: 121 tggtcccatgttaggttctgtacctttaagtgtgacttctacaaatcatttaaagcgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 tggtcccatgttaggttctgtacctttaagtgtgacttctacaaatcatttaaagtgata 380
Query: 181 tacccctaaagtaagaataaaataacatatttttataattaatatgtttaaacatgctaa 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 tacccctaaagtaagaataaaataacatatttttataattaatatgcttaaacatgctaa 440
Query: 241 cagatgagtggaactaaataagaagttttaaagtacctgttattattaggaagtataata 300
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 cagatgactggaactaaataagaagtttttaagtacctgttattattaggaagtataata 500
Query: 301 tttttattaaatgtacatctttgaaaagcagagattagattggtattttataatgactta 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 tttttattaaatgtacatctttgaaaagcagagattggattggtattttataatgactta 560
Query: 361 gtattttgcattaccaaaaaacacatttttaattagggaaaaatatttttttaaaaaaaa 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 gtattttgcattaccaaaaaacacatttttaattagggaaaa-tatttttttaaaaaaaa 619
Query: 421 ttgctctcacaatatacttttgttacctggttttaatgt 459
||||||| |||||||||||||||||||||||||||||||
Sbjct: 620 ttgctctgacaatatacttttgttacctggttttaatgt 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_g02.g1 MSMg01no332_g02.g1 CHROMAT_FILE:
MSMg01no332_g02.g1 PHD_FILE: MSMg01no332_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:46 2005
(727 letters)
>mm_chr14_110127028_110128153
Length = 1126
Score = 1328 bits (687), Expect = 0.0
Identities = 717/727 (98%), Gaps = 1/727 (0%)
Strand = Plus / Minus
Query: 1 agaaagttaaaaataaaattcaacagtattaatttttctctatattgctttctaaattaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 926 agaaagttaaaaataaaattcaacagtattaatttttctctatattgctttctaaactaa 867
Query: 61 tctcattaagccaccttcccaattttttcttattataatcatgactacattaggattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tctcattaagccaccttcccaattttttcttattataatcatgactacattaggattttc 807
Query: 121 agactaagcccttgagtattgaatgctggaattcgaataatttgtaaaagaacaaaataa 180
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 806 agactaagcccttgagtattgaatgctggaattcgaataattcataaaagaacaaaataa 747
Query: 181 catatcattaaattcatgggaacatccacaggaacaattctgaaagtgttggtccctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 catatcattaaattcatgggaacatccacaggaacaattctgaaagtgttggtccctggg 687
Query: 241 ttattctctgaaatttctcaatccaattcattcttcctttttatatttgttccaactgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttattctctgaaatttctcaatccaattcattcttcctttttatatttgttccaactgag 627
Query: 301 aaaaatggtccaaatagggtagtaaagcactccaaaaataataatattgcaaaggattat 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aaaaacggtccaaatagggtagtaaagcactccaaaaataataatattgcaaaggattat 567
Query: 361 actccaggggacaggggagtgtggttgtttttccactaattacaaatatggacaaaggaa 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 actccaggggacgggggagtgtggttgtttttccactaattacaaatatggacaaaggaa 507
Query: 421 agaacagtcatgtctcttgtctttaataaattagttactctgtgaggaggacttgaccaa 480
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 506 agaacagtcatgtctcttgtttttaataatttagttactctgtgaggaggacttgaccaa 447
Query: 481 agtcagtgctttccttttttaaggcaacaataattaggatagttagaaattattgttatt 540
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 446 agtcagtgctttcc-tttttaaggcaacaataattaggatagttacaaattattgttatt 388
Query: 541 attattttacttacttttacctggttcacataaaacaaaccatgtcaatggactatattc 600
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 attattttacttacatttacctggttcacataaaacaaaccatgtcaatggactatattc 328
Query: 601 ttttacagtattatattagttgagataatgtttttaggattaccagtgagcaaggatcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttttacagtattatattagttgagataatgtttttaggattaccagtgagcaaggatcag 268
Query: 661 tgagacagaaataaacattcattcatgcatctctattatgtataaacaatggatattttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgagacagaaataaacattcattcatgcatctctattatgtataaacaatggatattttt 208
Query: 721 ctgtaag 727
|||||||
Sbjct: 207 ctgtaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 727
Length of database: 1126
Length adjustment: 10
Effective length of query: 717
Effective length of database: 1116
Effective search space: 800172
Effective search space used: 800172
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
