Query= MSMg01no332_o19.b1 MSMg01no332_o19.b1 CHROMAT_FILE:
MSMg01no332_o19.b1 PHD_FILE: MSMg01no332_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:54 2005
(590 letters)
>mm_chr14_12228855_12229846
Length = 992
Score = 1073 bits (555), Expect = 0.0
Identities = 585/601 (97%), Gaps = 12/601 (1%)
Strand = Plus / Plus
Query: 1 ttctgaggcagacagctgagctgagctcaggacttcagtatagcctgggcaaaggagtga 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 193 ttctgaggcagacagctgagctgagctcaggacttcagtacagcctgggcaaaggagtga 252
Query: 61 gattttgttccagaaattctaaaacaaacttgaggttttcagaatgagaaactttccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gattttgttccagaaattctaaaacaaacttgaggttttcagaatgagaaactttccagg 312
Query: 121 aacacagctagtgggtgataaggctggagctcacatctgtggccatctatcaccaaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aacacagctagtgggtgataaggctggagctcacatctgtggccatctatcaccaaattc 372
Query: 181 catgttcctaagcctgatagctatcttccctaggccccttttctctttgcaaccacacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 catgttcctaagcctgatagctatcttccctaggccccttttctctttgcaaccacacca 432
Query: 241 tctaatgtatgttctgacacatcctctgtgcctagtcactgttttatgtctaagttggcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tctaatgtatgttctgacacatcctctgtgcctagtcactgttttatgtctaagttggcc 492
Query: 301 ctagaggggaaaaaattagacaaacaaacaaacaaac--------tcaattacctgatga 352
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 493 ctagaggggaaaaaattagacaaacaaacaaacaaacaaacaaactcaattacctgatga 552
Query: 353 aggaagctcagagaaaatgcctagggagtgaagcacagatggagaaggaatgacacaaat 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aggaagctcagagaaaatgcctagggagtgaagcacagatggagaaggaatgacacaaat 612
Query: 413 ttagctgaaagattttaggaaaagcctttaaaaaatagcgtagttaaatccattaaaaaa 472
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 613 ttagctgaaagattttaggaaaagccta-aaaaaatagcgtagttaaatccattaaaaaa 671
Query: 473 aaaaac---cagaaaaaatctcaaatataagttaaatatttcctgaactgtcttaattat 529
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 672 aaaaaaaaacagaaaaaatctcaaatataagttaactatttcctgaactgtcttaattat 731
Query: 530 ctgattcattgttcatacttgatagattggataaaggtaaacttcaaaggatgaaatttg 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ctgattcattgttcatacttgatagattggataaaggtaaacttcaaaggatgaaatttg 791
Query: 590 c 590
|
Sbjct: 792 c 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 992
Length adjustment: 10
Effective length of query: 580
Effective length of database: 982
Effective search space: 569560
Effective search space used: 569560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_o19.g1 MSMg01no332_o19.g1 CHROMAT_FILE:
MSMg01no332_o19.g1 PHD_FILE: MSMg01no332_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:54 2005
(716 letters)
>mm_chr14_12399192_12400306
Length = 1115
Score = 833 bits (431), Expect = 0.0
Identities = 494/515 (95%), Gaps = 1/515 (0%)
Strand = Plus / Minus
Query: 1 accttgggtaaccttgggtaatgcaactcccatgaagataagataaccccacaagaggtc 60
|||||||||||||||||||||||||||||| | ||||||||||||| | ||||||||||
Sbjct: 521 accttgggtaaccttgggtaatgcaactcctaagaagataagataaacaaacaagaggtc 462
Query: 61 ccagaacatacaaagctactggagctgagtaaatgtccttggacactgttggaagataca 120
|||||||| ||||||||||||||||| |||||||| |||||||| | |||||||||||||
Sbjct: 461 ccagaacagacaaagctactggagctcagtaaatggccttggacccagttggaagataca 402
Query: 121 cctcttcttcaccttgttagtcctcaactacaatagctgccactcaacactgaagaccca 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cctcttcttcacctagttagtcctcaactacaatagctgccactcaacactgaagaccca 342
Query: 181 gcagagggaaagagggatgtggggctcaggagcatcttagcaggtccctcccaccttcca 240
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 341 gcagagggaaagagggatgt-gggctcaggagcatctcagcaggtccctcccaccttcca 283
Query: 241 tctgtcagtcaaaagctgccacaacctcaatacaaagctcaggctctacatgttgctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tctgtcagtcaaaagctgccacaacctcaatacaaagctcaggctctacatgttgctctt 223
Query: 301 gatttaaggctgaatagggcactttatgcacaggcaagaggactgagttcgacaccagca 360
|||||||||||||||||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 222 gatttaaggctgaatagggcacacgatgcgcaagcaagaggactgagttcgacaccagca 163
Query: 361 cccattttgagagggaaaaaagaactgggagcatgctgtttggggaagggtgaggaatca 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cccattttgagaggggaaaaagaactgggagcatgctgtttggggaagggtgaggaatca 103
Query: 421 ctgaagttcggtggctggtagtgtctctccagattccatgtgagtctatctcatgggaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ctgaagttcggtggctggtagtgtctctccagattccatgtgagtctatctcatgggaat 43
Query: 481 aaggcagaacatctgatggcttcttctggcctcct 515
||| ||| |||||||||||||||||||||||||||
Sbjct: 42 aagacaggacatctgatggcttcttctggcctcct 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 716
Length of database: 1115
Length adjustment: 10
Effective length of query: 706
Effective length of database: 1105
Effective search space: 780130
Effective search space used: 780130
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
