CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCTGACGGGCCGCGGA
ATTCCCACTATTGCTNAAAAATCACACAAACTTTTCCTTTTTTTTTTTTT
TACTACCACCTAAATTCTTAACTGCCTTTCTTTTTTCAGTCAAGTCTATT
TTCTCACTCTCTTCATAGCCTTCCTAAAATCCTGCTTACTTTTCTATATT
CTCATTCTAAATAAGCAAAATATAGACAGTTGTCATTTCTAGTGAACAAG
AATGGATATTGCCGTATGGTTTGCTACACATCCATATTGAGTTTAATCCT
CCTTGTGGGGCACCAAGAGCACGGAACCTTAATCCTCTGTGTGTTTCAAG
GTGGTGCTTCTGGACGGTGATTAGAGATGGATAAATCTGATCAGAGTGGG
GCTACCAGGGTTCACACGCGGCTTTATAGGGAGAGAGACTAGGAGTTAGA
TACAAATGCTGTCTGTCCATCTCTTTCATGTGGCAATGGTGTTGGCAGAA
CACCAAGGAAACCATCAAAAGATTTGGCTTTCTTGACCTTAGACCTCTAG
ACATGTGATGCAGAATGTATCTCATTTCTTTATTACTCACTTAGCCTTTA
GTATCATATTACTAGAAACCCAAAAATAGACCAACACAGACAGTGATCTT
GGTGGTAGCCAGAATAATGGCTTCTGAAACTATTCCATGTCCTAATCTCC
ACAACTTTACAGATGGTGGACTGCAGTTGCAAACACTGC

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATTACAGATGTTTGTGGGCCATCATGTGT
TTACTGGGAACTGAACTCATGACCTCCGGAAGAACAGTCACTGTTAACTG
CTAAGCCAAGAGCCACCGACCAGACAGCATTCAGGAGCTGATCTGAGGCC
CCCTACACATATACAACAGAGGACTGCCTGGTCTGGCTTCAGAGGGAGAA
GACACGCCTAACCCTCAAGAGACTTGAGGCCCCAAGGAGTGGGGAGGTTT
GGGAGGGGGGGTGTCTTCTTTTTGGAGAAAGAGGTATGAGAAGTAACGGG
ATGAGGATTTCGTGCCCCTTTTTACTACGATGTGCCTTCCCCTTTTGTTT
GTTTAGTTTTTTCCCCCCCCGTTTTTAGAGATAAGATTTTTTCTCTTATC
TCCCCCCCCTTTCTATTCCTTCTTCCCCTTCTTTCCCCTTTTATCATCCT
CCCATTCCCCCCCCATCCACACTTTTTTCCCCTTTACCTTTTTTTTCCCT
TTCCATTATCTTATCCTATCTCTATTCACTTTCTATTTTCTCCCCCCTTC
CCCATTCTTTTCTATTTTCTCTCCCCACCTTTTCCTTTTGCCCTATCTCC
CTTTTTTTACTCTATCCACCCTTTCATTTTCCCCTTCCATTTTACTTCCC
CCCCTGTCCCCCCTCCCTATTCCCTCATCACCCTTCCTCTCCCTCCCCTC
ATTCTAATACTCACTCTCCCACCCTTTTCTTTCCCACATTTTTCTCTCTC
TTTTCCTG

Query= MSMg01no333_l09.b1 MSMg01no333_l09.b1 CHROMAT_FILE:
MSMg01no333_l09.b1 PHD_FILE: MSMg01no333_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:57 2005
         (646 letters)



>mm_chr14_87576095_87577140
          Length = 1046

 Score = 1212 bits (627), Expect = 0.0
 Identities = 642/647 (99%), Gaps = 2/647 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaatcacacaaacttttccttttttttttttttactaccacctaaattcttaactgcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 aaatcacacaaacttttccttttttttttttttactaccacctaaattcttaactgcctt 724

                                                                       
Query: 61  tcttttttcagtcaagtctattttctcactctcttcatagccttcctaaaatcctgctta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tcttttttcagtcaagtctattttctcactctcttcatagccttcctaaaatcctgctta 664

                                                                       
Query: 121 cttttctatattctcattctaaataagcaaaatatagacagttgtcatttctagtgaaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cttttctatattctcattctaaataagcaaaatatagacagttgtcatttctagtgaaca 604

                                                                       
Query: 181 agaatggatattgccgtatggtttgctacacatccatattgagtttaatcctccttgtgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 agaatggatattgccgtatggtttgctacacatccatattgagtttaatcctccttgtgg 544

                                                                       
Query: 241 ggcaccaagagcacggaaccttaatcctctgtgtgtttcaaggtggtgcttctggacggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ggcaccaagagcacggaaccttaatcctctgtgtgtttcaaggtggtgcttctggacggt 484

                                                                       
Query: 301 gattagagatggataaatctgatcagagtggggctaccagggttcaca-cgcggctttat 359
           |||||||||||||||||||||||||||||||||||||||||||| | |  | ||||||||
Sbjct: 483 gattagagatggataaatctgatcagagtggggctaccagggttga-atggtggctttat 425

                                                                       
Query: 360 agggagagagactaggagttagatacaaatgctgtctgtccatctctttcatgtggcaat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agggagagagactaggagttagatacaaatgctgtctgtccatctctttcatgtggcaat 365

                                                                       
Query: 420 ggtgttggcagaacaccaaggaaaccatcaaaagatttggctttcttgaccttagacctc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggtgttggcagaacaccaaggaaaccatcaaaagatttggctttcttgaccttagacctc 305

                                                                       
Query: 480 tagacatgtgatgcagaatgtatctcatttctttattactcacttagcctttagtatcat 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tagacatgtgatgcagaatgtatctcatttctttattactcacttagcctttagtatcat 245

                                                                       
Query: 540 attactagaaacccaaaaatagaccaacacagacagtgatcttggtggtagccagaataa 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 attactagaaacccaaaaatagaccaacacagacagtgatcttggtggtagccagaataa 185

                                                          
Query: 600 tggcttctgaaactattccatgtcctaatctccacaactttacagat 646
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tggcttctgaaactattccatgtcctaatctccacaactttacagat 138


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)