Query= MSMg01no334_a11.b1 MSMg01no334_a11.b1 CHROMAT_FILE:
MSMg01no334_a11.b1 PHD_FILE: MSMg01no334_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:20 2005
(191 letters)
>mm_chr14_65349189_65349785
Length = 597
Score = 323 bits (167), Expect = 4e-93
Identities = 189/197 (95%), Gaps = 6/197 (3%)
Strand = Plus / Plus
Query: 1 acctgctgattgtctttcagtgttggtgtaaggttagcacacccccagcaggacttcatt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 acctgctgattgtctttcagtgttggtgtaaggttagcacaccccccgcaggacttcatt 260
Query: 61 gagctcataaa--ggattacctttaaagagatgaatgtgtacatggatggaccagaggtc 118
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagctcataaaatggattacctttaaagagatgaatgtgtacatggatggaccagaggtc 320
Query: 119 atgtttggtgttg-cttctttgacttttgagc-agggtctctcactggta-ccggg-tta 174
||||||||||||| |||||||||||||||||| ||||||||||||||| | ||||| |||
Sbjct: 321 atgtttggtgttgtcttctttgacttttgagccagggtctctcactgggatccggggtta 380
Query: 175 ggaagttaggctcggct 191
|||||||||||||||||
Sbjct: 381 ggaagttaggctcggct 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 597
Length adjustment: 8
Effective length of query: 183
Effective length of database: 589
Effective search space: 107787
Effective search space used: 107787
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no334_a11.g1 MSMg01no334_a11.g1 CHROMAT_FILE:
MSMg01no334_a11.g1 PHD_FILE: MSMg01no334_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:20 2005
(302 letters)
>mm_chr14_65545987_65546688
Length = 702
Score = 468 bits (242), Expect = e-136
Identities = 248/250 (99%)
Strand = Plus / Minus
Query: 1 actgaacatacggttcctttttcaaagatggcattacagatgctgctggaatagagtaga 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 308 actgaacatacggttcctttttcaaagatggcattacggatgctgctggaatagagtaga 249
Query: 61 acttaggatactttcagttggaaaatctcaaattctttggaaagtaactttataaattta 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agttaggatactttcagttggaaaatctcaaattctttggaaagtaactttataaattta 189
Query: 121 tttattttaatacagcagaaaaatccgggacaggaaaagctatgtaacagctgacctagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tttattttaatacagcagaaaaatccgggacaggaaaagctatgtaacagctgacctagt 129
Query: 181 gatactaacatatcctctgaaatctttcttcttgttgtgttttggttattttgctatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gatactaacatatcctctgaaatctttcttcttgttgtgttttggttattttgctatgac 69
Query: 241 tagcattctt 250
||||||||||
Sbjct: 68 tagcattctt 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
