Query= MSMg01no334_b15.b1 MSMg01no334_b15.b1 CHROMAT_FILE:
MSMg01no334_b15.b1 PHD_FILE: MSMg01no334_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:25 2005
(562 letters)
>mm_chr14_116715453_116716414
Length = 962
Score = 1050 bits (543), Expect = 0.0
Identities = 555/559 (99%)
Strand = Plus / Minus
Query: 4 gaattcatacattctatctctaataatttacagacatctaaacatgtttcagatctttgt 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gaattcatacattctatatctaataatttacagacatctaaacatgtttcagatctttgt 703
Query: 64 ttcttcatacactaatttaataattctattgaaattcagctaacatttcttacataattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ttcttcatacactaatttaataattctattgaaattcagctaacatttcttacataattt 643
Query: 124 gttcttttcctgtgttttgctcatgatttcattatcttctggaagaatggttttgtatat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gttcttttcctgtgttttgctcatgatttcattatcttctggaagaatggttttgtatat 583
Query: 184 ttaatttaaaagctttgccctaacaacagtttaaaaaattccattaatctacatttctac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ttaatttaaaagctttgccctaacaacagtttaaaaaattccattaatctacatttctac 523
Query: 244 ttgaagtaaaattacaataacataatctaccacatataagtcttcatgaaacataagtaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttgaagtaaaattacaataacataatctaccacatataagtcttcatgaaacataagtaa 463
Query: 304 acatgaatatttttaaatggacacttatgaagaaagaacaagactcctattacatgggct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 acatgaatatttttaaatggacacttatgaagaaagaacaagactcctattacatgggct 403
Query: 364 aaaacaaattaatctatagaatcatgagcacaggttctttttatagtagcaatcggacaa 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 402 aaaacaaattaatctatagaatcatgagcacaggttctttttatagtagcaatcgggcaa 343
Query: 424 caggaaaaaaatggaactgatttcaacgttactctcagaagcaactgaaacttggtacat 483
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 caggaaaaaaatggagctgatttcaacgttactctcagaagcaactgaaacttggtacat 283
Query: 484 tggaagaatacggagctaaaatgtattttttttgtttaacatatattacaacatataata 543
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tggaagaatatggagctaaaatgtattttttttgtttaacatatattacaacatataata 223
Query: 544 caccattttctgatgtatt 562
|||||||||||||||||||
Sbjct: 222 caccattttctgatgtatt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_b15.g1 MSMg01no334_b15.g1 CHROMAT_FILE:
MSMg01no334_b15.g1 PHD_FILE: MSMg01no334_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:25 2005
(114 letters)
>mm_chr14_116525514_116526026
Length = 513
Score = 213 bits (110), Expect = 3e-60
Identities = 113/114 (99%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 1 acattaactgttatttatccaacatgaaaaaaaatgattaaaaaaatgtggattaagttt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 acattaactgttatttatccaacatgaaaaaaa-tgattaaaaaaatgtggattaagttt 259
Query: 61 ctaaaatgtcctgaagtaaaatataacaacatttggtatctaattttgaaacac 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctaaaatgtcctgaagtaaaatataacaacatttggtatctaattttgaaacac 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 114
Length of database: 513
Length adjustment: 8
Effective length of query: 106
Effective length of database: 505
Effective search space: 53530
Effective search space used: 53530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
