Query= MSMg01no334_k04.b1 MSMg01no334_k04.b1 CHROMAT_FILE:
MSMg01no334_k04.b1 PHD_FILE: MSMg01no334_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:07 2005
(577 letters)
>mm_chr14_61490891_61491867
Length = 977
Score = 884 bits (457), Expect = 0.0
Identities = 492/505 (97%), Gaps = 4/505 (0%)
Strand = Plus / Minus
Query: 6 ggaattctagttgtctacccttcagcaagaaagccttaggaaagcaccaggaacccaggg 65
||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaattccagttgcctagccttcagcaagaaagccttaggaaagcaccaggaacccaggg 442
Query: 66 ggctgcatggaagacagtgcaggattgctctgtgcagatgctgggagccctcatacaggg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctgcatggaagacagtgcaggattgctctgtgcagatgctgggagccctcatacaggg 382
Query: 126 gttcccctacacctgaggataccagggaagtcccatagaagacttcagagctgcacagtc 185
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gttcccctacacctgaggataccaggaaagtcccatagaagacttcagagctgcacagtc 322
Query: 186 acaccgggaggcagaagggctcattggagggcgaggactcataaaagattaattatagtg 245
||||||||||||||| ||||||||||||||| |||| ||||||||||| |||||||||||
Sbjct: 321 acaccgggaggcagaggggctcattggagggtgaggcctcataaaagaataattatagtg 262
Query: 246 cccaaacccccatggccaggaccacaaagttgtaagcaactgccattggatgctgagtgt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaaacccccatggccaggaccacaaagttgtaagcaactgccattggatgctgagtgt 202
Query: 306 gtgtgtgtgtatgtctgagtgagtgtgcatatatgtgtgcgtgggggggggaactgtgtt 365
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 201 gtgtgtgtgtatgtctgagtgagtgtgcatatatgtgtg---ggggggggga-ctgtgtt 146
Query: 366 gtatcttgtggactgagaaagggatgtgtcatgaatttgccccatcccacccttgttacc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gtatcttgtggactgagaaagggatgtgtcatgaatttgccccatcccacccttgttacc 86
Query: 426 tgttaaaaggatcctgtaggaagcactccttccagatcatggatgccacggccctggaca 485
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 85 tgttaaaaggatcctgtaggaagcactccttccagatcatggatgccacagccctggaca 26
Query: 486 tcaggtatgagtaatacttggcacc 510
|||||||||||||||||||||||||
Sbjct: 25 tcaggtatgagtaatacttggcacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_k04.g1 MSMg01no334_k04.g1 CHROMAT_FILE:
MSMg01no334_k04.g1 PHD_FILE: MSMg01no334_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:07 2005
(464 letters)
>mm_chr14_61309883_61310746
Length = 864
Score = 882 bits (456), Expect = 0.0
Identities = 462/464 (99%)
Strand = Plus / Plus
Query: 1 ctccacgtggaatgccctggcctccttccgtaaaatgggctcctttaaaagactaaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctccacgtggaatgccctggcctccttccgtaaaatgggctcctttaaaagactaaaatc 260
Query: 61 ttctgtccttcaaggaattcagaaccgggagggggcagaagtttccaaggaggagcctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctgtccttcaaggaattcagaaccgggagggggcagaagtttccaaggaggagcctac 320
Query: 121 aggagacccaggaagggctgctcccaatggcaccgttgccatcctgggaaagggcctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggagacccaggaagggctgctcccaatggcaccgttgccatcctgggaaagggcctggg 380
Query: 181 caggtgtacatccttgggccctgtaggagatggcgccgggtctgactgctcagaccccga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggtgtacatccttgggccctgtaggagatggcgccgggtctgactgctcagaccccga 440
Query: 241 ggacacggaggacgccttccagaggagcacacaccgttctcgcagcatccgcagggccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggacacggaggacgccttccagaggagcacacaccgttctcgcagcatccgcagggccta 500
Query: 301 tggcctgggccgcatcagcctgctggacctggggcggcagtcagtgccggagcccgccgt 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 tggcctgggccgcatcagcctgctggacctggggcggcagccagtgccggagcccgccgt 560
Query: 361 gtgtgagatccaagttcgagaccctgaacccagcagggctgtgcctctgccatgcagaag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 gtgtgagatccaagttcgagaccctgaacccagcagggctgtgcctctgccacgcagaag 620
Query: 421 caagagcatcgacagcttgagcgtcctgaagagctccttcaagc 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caagagcatcgacagcttgagcgtcctgaagagctccttcaagc 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
