Query= MSMg01no334_n20.b1 MSMg01no334_n20.b1 CHROMAT_FILE:
MSMg01no334_n20.b1 PHD_FILE: MSMg01no334_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:26 2005
(411 letters)
>mm_chr14_33009229_33010039
Length = 811
Score = 702 bits (363), Expect = 0.0
Identities = 389/401 (97%), Gaps = 9/401 (2%)
Strand = Plus / Plus
Query: 2 acttataataggataatactaaaagagagcacgtggatccatacaccagactaacacggg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttataataggataatactaaaagagagcacgtggatccatacaccagactaacacggg 260
Query: 62 aatggaatattaatgtatgggttagagaggacgccagactccagngaggtgagtttctgt 121
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||
Sbjct: 261 aatggaatattaatgtatgggttagagaggacaccagactccag-gaggtgagtttccgt 319
Query: 122 gaaattctttgcctcgtgagtagcttccaagcctctcggcctgtca-gctgactcgacc- 179
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 320 gaaattctttgcctcgtgagtagcttccaagcctctcggcctgtcaagctgactcgacca 379
Query: 180 ---ttttgtgtggcattcagccactcatatacaatcaaagtgacaaatatgccaagacac 236
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagt---gtgtggcattcagccactcatatacaatcaaagtgacaaatatgccaagacac 436
Query: 237 tgcatacaggggtaatatctgagatgctcttacgtgtgtattgctgacactctaggacac 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgcatacaggggtaatatctgagatgctcttacgtgtgtattgctgacactctaggacac 496
Query: 297 aatggtactaaaacaccagtaagcactagcgttacaactatgtagaagagaaaggaaacg 356
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 497 aatggtactaaaacaccagtaagcactagtgttacaactatgtagaagagaaaggaaacg 556
Query: 357 gggccgaggtatcattggacctgagatagttaccaggctat 397
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gggccgaggtatcattggacctgagatagttaccaggctat 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_n20.g1 MSMg01no334_n20.g1 CHROMAT_FILE:
MSMg01no334_n20.g1 PHD_FILE: MSMg01no334_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:26 2005
(243 letters)
>mm_chr14_33189192_33189834
Length = 643
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Minus
Query: 1 atctggctgcataagcacccacaaaaataataaaaactcctccctggcaccgtctcccag 60
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 443 atctggctgcataggcacccacaaaaataataaaaactcctccctggcagcgtctcccag 384
Query: 61 tcttagcccatagggagagccctccaatatcaggtgcactggatctgaaggaaataagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tcttagcccatagggagagccctccaatatcaggtgcactggatctgaaggaaataagaa 324
Query: 121 aatgcaatctaataacagagctccatcccctaataaagcaccattgccagaagcattata 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 323 aatgcaatctaataacagagctccatcccctaataaagcaccattgccagaagcattaga 264
Query: 181 cattgcattccgaagcctgccaagaaccaggggcaggtgaagttaacgagcttccaagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cattgcattccgaagcctgccaagaaccaggggcaggtgaagttaacgagcttccaagta 204
Query: 241 ggg 243
|||
Sbjct: 203 ggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
