Query= MSMg01no335_k16.b1 MSMg01no335_k16.b1 CHROMAT_FILE:
MSMg01no335_k16.b1 PHD_FILE: MSMg01no335_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:30 2005
(633 letters)
>mm_chr14_31623395_31624432
Length = 1038
Score = 1137 bits (588), Expect = 0.0
Identities = 624/638 (97%), Gaps = 5/638 (0%)
Strand = Plus / Minus
Query: 1 cttaaatctggtatgctacaataaatgaaaattaagttattaaacaagacaaaggcccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 cttaaatctggtatgctacaataaatgaaaattaagttattaaacaagacaaaggcccag 779
Query: 61 ctttctgttttaggtgaaagtgtgcacttatgcacttcctcagtcatctgcttacgccat 120
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 778 ctttctgttctaggtgaaagtgtgcacttacgcacttcctcagtcatctgcttacgccat 719
Query: 121 caagtgactccccagggcctcagcatgccagggaagcgctcaccgctaagctctgctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 caagtgactccccagggcctcagcatgccagggaagcgctcaccgctaagctctgctctc 659
Query: 181 ctgccttcaggaactttaaatactacttttactaactactataaaagcaccgttttcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctgccttcaggaactttaaatactacttttactaactactataaaagcaccgttttcatt 599
Query: 241 caatctacctttatcacccccc-atcagtaatcctcagagtctggctcgaggacaatatg 299
|||||||| |||| |||||||| |||||| || |||||||||||||||||||||||||||
Sbjct: 598 caatctacttttaccacccccccatcagtgattctcagagtctggctcgaggacaatatg 539
Query: 300 acatgccaactgccatctatccacaaaaaagttcaagtcagaaagcaatagttaagtgtt 359
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 538 acatgccaactgccatctatccataaaaaagttcaagtcagaaagcaatagttaagtgtt 479
Query: 360 cataaattttcacagaagttttaaaacataattttatatatcttcacgctagtaaaagtg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cataaattttcacagaagttttaaaacataattttatatatcttcacgctagtaaaagtg 419
Query: 420 ctcttgtatttaagtatcttaatcttaaggttcttatttcttggaattaattgt----ca 475
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 418 ttcttgtatttaagtatcttaatcttaaggttcttatttcttggaattaattgtttgtca 359
Query: 476 cataatatctataggaagtaaaaaaggaaaaattagactggtcctttggcacaaatggct 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cataatatctataggaagtaaaaaaggaaaaattagactggtcctttggcacaaatggct 299
Query: 536 gcagcagctctgctctgggcacacaagtgatctggtgctgtcaagaagctacctgaactg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gcagcagctctgctctgggcacacaagtgatctggtgctgtcaagaagctacctgaactg 239
Query: 596 tgaacaacagacatgaacacggagtgagggcctctact 633
||||||||||||||||||| ||||||||||||||||||
Sbjct: 238 tgaacaacagacatgaacatggagtgagggcctctact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1038
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1028
Effective search space: 640444
Effective search space used: 640444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_k16.g1 MSMg01no335_k16.g1 CHROMAT_FILE:
MSMg01no335_k16.g1 PHD_FILE: MSMg01no335_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:30 2005
(155 letters)
>mm_chr14_31443222_31443773
Length = 552
Score = 267 bits (138), Expect = 2e-76
Identities = 147/152 (96%), Gaps = 4/152 (2%)
Strand = Plus / Plus
Query: 1 ctggagagaaatgggcagcagttcttaaggacatcagggcatagggcattcctgtggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggagagaaatgggcagcagttcttaaggacatcagggcatagggcattcctgtggctc 260
Query: 61 tctcatgggcacagccctggactgtcccagcccagcattaacctcttagcacagttctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcatgggcacagccctggactgtcccagcccagcattaacctcttagcacagttctgg 320
Query: 121 ccaggctttctcctgagcaggggggggggggt 152
||||||| ||||||| |||||||||||||
Sbjct: 321 ccaggctgtctcctg----ggggggggggggt 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 552
Length adjustment: 8
Effective length of query: 147
Effective length of database: 544
Effective search space: 79968
Effective search space used: 79968
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
