Query= MSMg01no336_g24.b1 MSMg01no336_g24.b1 CHROMAT_FILE:
MSMg01no336_g24.b1 PHD_FILE: MSMg01no336_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:30 2005
(457 letters)
>mm_chr14_27955981_27956837
Length = 857
Score = 661 bits (342), Expect = 0.0
Identities = 374/392 (95%), Gaps = 12/392 (3%)
Strand = Plus / Minus
Query: 78 tgggcagcatcccctgagcag------------aaaaaaaaaaaaaactactttaaaatg 125
||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 857 tgggcagcatcccttgagcagaaaaaaaaaaaaaaaaaaaaaaaaaactactttaaaatg 798
Query: 126 ccacaaacaggtgagctctctacaccacccccccttttgagagagggtttctctgtgtag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ccacaaacaggtgagctctctacaccacccccccttttgagagagggtttctctgtgtag 738
Query: 186 ctctggctatcccagaactctctctctgtagaccagactggcctcaaactcagagatttg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ctctggctatcccagaactctctctctgtagaccagactggcctcaaactcagagatttg 678
Query: 246 cctgcttctgcctcccaagtaatgaatgaccaagactcacccaggaccttcaccccatga 305
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 677 cctgcttctgcctcccaagtaatggatgaccaagactcacccaggaccttcaccccatga 618
Query: 306 atgaggtcatccaaatggccagtgagatggacaccgtaaccctcacctttcagagaaaga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atgaggtcatccaaatggccagtgagatggacaccgtaaccctcacctttcagagaaaga 558
Query: 366 aacagattctggcctgtgcggccaccgtaactggacagcgccatggaatgaccaaacctc 425
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 557 aacagattctggcctgtgcggccaccataactggacagcgccatggaatgaccaaacctc 498
Query: 426 ccaaagccctaacgattcataggttccgacag 457
||||||| ||||| |||||||||||| |||||
Sbjct: 497 ccaaagctctaacaattcataggttctgacag 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_g24.g1 MSMg01no336_g24.g1 CHROMAT_FILE:
MSMg01no336_g24.g1 PHD_FILE: MSMg01no336_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:30 2005
(473 letters)
>mm_chr14_27814791_27815663
Length = 873
Score = 884 bits (457), Expect = 0.0
Identities = 469/473 (99%)
Strand = Plus / Plus
Query: 1 cttccttattctaggtcgaagtattggaaaatgtctttagagtgaactgctaccctggca 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcattattctaggtcgaagtattggaaaatgtctttagagtgaactgctaccctggca 260
Query: 61 ttgacatcagagaggacctagctcaaaagctgaacttagaggaagacagaatccaggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgacatcagagaggacctagctcaaaagctgaacttagaggaagacagaatccaggtag 320
Query: 121 ggtgcaaacacagttgttacccgtgatgataaataatgtggtaatgtgtctgagaactgt 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ggtgcaaacacagttgttacccgtgatgataaataatgtggtaatatgtctgagaactgt 380
Query: 181 tttattttcccttgattctagatttggttccaaaatcgccgagcaaagatgaaaaggtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttattttcccttgattctagatttggttccaaaatcgccgagcaaagatgaaaaggtcc 440
Query: 241 cgtagagaatcacagtttctaatggcgaaaaaacccttcaacccagatcttctgaaatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgtagagaatcacagtttctaatggcgaaaaaacccttcaacccagatcttctgaaatag 500
Query: 301 gtagaaaattacacatgttggcttctcttccagttgtatagtacagaagaaatcaatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtagaaaattacacatgttggcttctcttccagttgtatagtacagaagaaatcaatgga 560
Query: 361 aattccaagtacttaaaatgttacagttctctcctgtatctaatctagatattgtcattc 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 aattccaagtacttaaaatgttacagttctctcctgtatctaatctagattttgtcattc 620
Query: 421 tttctgaaaatactgcaaataattacggttctagaacagtacatttttagtta 473
||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 tttctgaaaatactgcaaataattatggttctagaacagtacatttttagtta 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
