Query= MSMg01no336_m21.b1 MSMg01no336_m21.b1 CHROMAT_FILE:
MSMg01no336_m21.b1 PHD_FILE: MSMg01no336_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:58 2005
(469 letters)
>mm_chr14_36695609_36696477
Length = 869
Score = 665 bits (344), Expect = 0.0
Identities = 347/348 (99%)
Strand = Plus / Minus
Query: 122 tcaggtgacagcagatgctggcaaggatgtggagaaagaggaacactcctccattgttgg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tcaggtgacagcagatgctggcaaggatgtggagaaagaggaacactcctccattgttgg 810
Query: 182 tgggattgcaagcttgtacaaccactctggaaatcagtctggccgttcctcagaaaattg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 809 tgggattgcaagcttgtacaaccactctggaaatcagtctggccgttcctcaggaaattg 750
Query: 242 gacatagtactaccggaggatccagcaatacctctcctgggcatatatctagaagatgtc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gacatagtactaccggaggatccagcaatacctctcctgggcatatatctagaagatgtc 690
Query: 302 ccaaccggtaagaagaaaactttaaatccataatattggaaccttgtggtcccagccact 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ccaaccggtaagaagaaaactttaaatccataatattggaaccttgtggtcccagccact 630
Query: 362 gcaatacaggctttcttagacaaatgcagtttttggaagtgagattcctagcaaattgtt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gcaatacaggctttcttagacaaatgcagtttttggaagtgagattcctagcaaattgtt 570
Query: 422 agtgcatcaaacaacattgctccaatcataaattttataaaatgtttt 469
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agtgcatcaaacaacattgctccaatcataaattttataaaatgtttt 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_m21.g1 MSMg01no336_m21.g1 CHROMAT_FILE:
MSMg01no336_m21.g1 PHD_FILE: MSMg01no336_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:58 2005
(425 letters)
>mm_chr14_36507956_36508781
Length = 826
Score = 760 bits (393), Expect = 0.0
Identities = 418/427 (97%), Gaps = 3/427 (0%)
Strand = Plus / Plus
Query: 1 agagatttaatattcacacttattagtgtcaatttgctttatgatttactttttccaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagatttaatattcacacttattagtgtcaatttgctttatgatttactttttccaaca 260
Query: 61 gagaatatgatgaatgtgattgacattttgcctaagtggctaaggattaatttctaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaatatgatgaatgtgattgacattttgcctaagtggctaaggattaatttctaggga 320
Query: 121 gacaagaaacctattccctcgtgggtttctgttcctgcttttctgtcaagtgcattctct 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gacaagaaacctattccctcgtgggtttctgttcctgcttttctgtcaa-tgcattctct 379
Query: 181 cacatctcagttctgatttccttttccactttccccagctttaggccactctgctttgtc 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 catatctcagttctgatttccttttccactttccccagctttaggccactctgctttgtc 439
Query: 241 attct--cttcatcttccctttcaggaatgtattcctaaggtctttttcctccacagccc 298
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attctagctccatcttccctttcaggaatgtattcctaaggtctttttcctccacagccc 499
Query: 299 aggttatgtgaactacttctgaaaacttttcttgtgtctgtctaagagagttgaaccctt 358
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aggttatgtgaattacttctgaaaacttttcttgtgtctgtctaagagagttgaaccctt 559
Query: 359 ttcttgacagctgatatgccttgagtaaagcccagattttccgttcttttagatggagag 418
| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 560 tgcttgacagctgatatgccttgagtaaagcccagattttccgttctcctagatggagag 619
Query: 419 tttgaag 425
|||||||
Sbjct: 620 tttgaag 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 826
Length adjustment: 9
Effective length of query: 416
Effective length of database: 817
Effective search space: 339872
Effective search space used: 339872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
