Query= MSMg01no337_h22.b1 MSMg01no337_h22.b1 CHROMAT_FILE:
MSMg01no337_h22.b1 PHD_FILE: MSMg01no337_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:53 2005
(580 letters)
>mm_chr14_103499749_103500730
Length = 982
Score = 754 bits (390), Expect = 0.0
Identities = 411/418 (98%), Gaps = 2/418 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctacaatatc-ccaagcgctcttaactgcagagcagtgctccagccccttca 62
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ggaattctctacaaaatcaccaagcgctcttaactgcagagcagtgctccagccccttca 399
Query: 63 gttcatatacacaacgtctaatgtttaaatcgggttagtcattctaactcctcagacata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gttcatatacacaacgtctaatgtttaaatcgggttagtcattctaactcctcagacata 339
Query: 123 -ttttttctggttaaaaagattaaaactcctttcttctagtttgtttaaatgtacattat 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tttttttctggttaaaaagattaaaactcctttcttctagtttgtttaaatgtacattat 279
Query: 182 atggtgacggtcttaagtgtgtgacagaacctgttctcatgacttcatctttttaaaaat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 278 atggtgacggtcttaagtgtgtgacagaacctgttctcatgacttcatcttttaaaaaat 219
Query: 242 ataataatctactctgggctagagagacagcttagcagttaagagtgcttgctgttcttc 301
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ataataatttactctgggctagagagacagcttagcagttaagagtgcttgctgttcttc 159
Query: 302 cagctgatctgagttcagttcccagcgctcaggatgagtggctcacatctgcctgtaaat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 cagctgatctgagttcagttcccagcgctcaggatgagtggctcacatctgcctgtaaat 99
Query: 362 aactccagctccaaggaatccaacatccactccagacaccatgggcactgcacacaaa 419
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 98 aactccagctccaaggaatccaacatccactccagacaccacgggcactgcactcaaa 41
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 982
Length adjustment: 10
Effective length of query: 570
Effective length of database: 972
Effective search space: 554040
Effective search space used: 554040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_h22.g1 MSMg01no337_h22.g1 CHROMAT_FILE:
MSMg01no337_h22.g1 PHD_FILE: MSMg01no337_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:53 2005
(507 letters)
>mm_chr14_103319142_103320047
Length = 906
Score = 957 bits (495), Expect = 0.0
Identities = 504/507 (99%), Gaps = 1/507 (0%)
Strand = Plus / Plus
Query: 1 aaagacaattaattaattagcagaagttgcaactgaaggctgagcatactgagctcggtg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagacaattaattagttagcagaagttgcaactgaaggctgagcatactgagctcggtg 260
Query: 61 tttattactcgcagaaaaggggcagcaggtatgacacagtaagacgttattagtggtgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttattactcgcagaaaaggggcagcaggtatgacacagtaagacgttattagtggtgag 320
Query: 121 gatgatgaagctgctgagcctgagccttcccctgaggttagactctcccacaactgagaa 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgatgaagatgctgagcctgagccttcccctgaggttagactctcccacaactgagaa 380
Query: 181 gggaccctttgaaattcaaacgttatcataaataacgacaagactttagaggatcctaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggaccctttgaaattcaaacgttatcataaataacgacaagactttagaggatcctaat 440
Query: 241 cagatccactttcctaaacagtccctgcccagactgggaatgaatgcaagagacagggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagatccactttcctaaacagtccctgcccagactgggaatgaatgcaagagacagggaa 500
Query: 301 ccccaacatggatgggtttagatgtgatgagctctagcgaggccgactggagagtttcaa 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccc-aacatggatgggtttagatgtgatgagctctagcgaggccgactggagagtttcaa 559
Query: 361 gctagagaaggcgaggggagaatgacaatttcagactgaaatagaggaggctgatgagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gctagagaaggcgaggggagaatgacaatttcagactgaaatagaggaggctgatgagca 619
Query: 421 gcacgctgattaagcaggtaggtctcagatcgagttcccaggggctgcctcagactgaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcacgctgattaagcaggtaggtctcagatcgagttcccaggggctgcctcagactgaca 679
Query: 481 ctgctccaaattaaccacacattccct 507
|||||||||||||||||||||||||||
Sbjct: 680 ctgctccaaattaaccacacattccct 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 906
Length adjustment: 10
Effective length of query: 497
Effective length of database: 896
Effective search space: 445312
Effective search space used: 445312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
