CCTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGA
TTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTC
CCCTATTCGATTTTAAAAACGATCAGAAATTGAAATAAATTTAGAAAAGC
TGATCATATTTACCTGTAGGGAAAATAGAAACAAAATAAAATAAAACTGA
AATTTTATATGTGTATTTCCAATTGTTGTTTCCATCTTTCCATTTAGACT
GGGTGAAAAACTGTGTCTATGAGATATGAATTAGAGAATGTAGCCCAAGG
AAGAAAAAGGAAACAAAAGGTAAGGCAGCTGGAGTTTTGTGTGTTGATAA
TTTTCTGGATCTTCATTTTTTATAGTCATTCTTTCTCAGTGTTAGATTGT
TAGTCTTTCTAGATATAATTTTTGATAGGTGTAGCATATTTTAAAGACCA
GACAGAGGGAATAGGTGACTGCACCTTTGATTAAATGAGTGTTTTATTAG
CCAATCACTTTTTTCTACCATTGTTTGAAAATGGGTTTGAATGCCAATTC
TTTTGCATTTTGAGTTTCATCAAAGAAAGGATTTTCAGGAGCATTACCTT
ATACTAAGGCAAAGAGTGACCAAATGAAACTTCTAGAAATACCCTGTGAG
GGGGCTTAAAAACCTCCCAAAGAAAAACAGAATGGCATCTGGCCCCAACA
TTATT

ACATTCTTTNATTTTTTTTTCCTTTTCTATATACATTTTTAATTCCCCCC
TCCCAATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGAAATGTGGTACATTTACAC
AATGGAGCACTACACAGCTATTATAAACAATGATTTCATGAAATTCTCAA
GCAAATGGAAGGAACTAGAGAATATCATCCTGATTGAGGTAACACAGACA
CAAAAGAACACACATGGTATGTACTCATTGATAAGTGGATATTAGCCCCA
AAACCTAGAATACCCATGATATAACCCACAAACCATATGGAGTTTAAGAA
GAAGGAAGACCAAAGTGTGAATGCTTCAATTCTACATAGAAGTGGGAACA
AAATAATCACAGGAAGTAGAGAGACTGAGGGTCCTGGGAGGGAGAGAGAA
GGGGAGGAAAAAATGGTGGACAGGATCAGGTACTGGAAGGGACAGAAGTA
CAAAGGGTCGGGAAATTGAATAAAAATATGTACCAGTGGGTACTGGGGAG
CCTGGGGTAGCCAATATAAAGTCCCACTTGCCAGGGAAGCAAGAGGCTCT
TAGAACCCTCTGACTTTAGCCTACATATGCTTCCTCTAGCCAGACATAAA
CTTATTCTAACCATTTCTTATATTTTATTTTTGATCCCCACCTTGAGTTT
ATGTCACCATCCCTTATTCTCCCCAAATTCTTTAAACCATACATTTTTCC
TTGTCTTAAATATCAGCCCGTCATACACCTCTCGTATCTCTAAGCCCTAC
AAAATAAAACCCTTTCTCAAATC

Query= MSMg01no339_c12.b1 MSMg01no339_c12.b1 CHROMAT_FILE:
MSMg01no339_c12.b1 PHD_FILE: MSMg01no339_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:56 2005
         (531 letters)



>mm_chr14_83965814_83966743
          Length = 930

 Score =  998 bits (516), Expect = 0.0
 Identities = 525/528 (99%), Gaps = 2/528 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgttcagctctgagcccca-ttttttaatggggttatttgattttctggagt 63
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 842 gaattctttgttcagctctgagccccatttttttaatggggttatttgattttctggagt 783

                                                                       
Query: 64  ccaccttcttgagttctttatatatattggatattagtcccctattcgattttaaaaacg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ccaccttcttgagttctttatatatattggatattagtcccctattcgattttaaaaacg 723

                                                                       
Query: 124 atcagaaattgaaataaatttagaaaagctgatcatatttacctgtagggaaaatagaaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atcagaaattgaaataaatttagaaaagctgatcatatttacctgtagggaaaatagaaa 663

                                                                       
Query: 184 caaaataaaataaaactgaaattttatatgtgtatttccaattgttgtttccatctttcc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 caaaataaaataaaactgaaattttatatgtgtatttccaattgttgtttccatctttcc 603

                                                                       
Query: 244 atttagactgggtgaaaaactgtgtctatgagatatgaattagagaatgtagcccaagga 303
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 602 atttagactgggtgaaaaactgtgtctatgagatatgcattagagaatgtagcccaagga 543

                                                                       
Query: 304 agaaaaaggaaacaaaaggtaaggcagctggagttttgtgtgttgataattttctggatc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agaaaaaggaaacaaaaggtaaggcagctggagttttgtgtgttgataattttctggatc 483

                                                                       
Query: 364 ttcattttttatagtcattctttctcagtgttagattgttagtctttctagatataattt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttcattttttatagtcattctttctcagtgttagattgttagtctttctagatataattt 423

                                                                       
Query: 424 ttgataggtgtagcatattttaaagaccagacagagggaataggtgactgcacctttgat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttgataggtgtagcatattttaaagaccagacagagggaataggtgactgcacctttgat 363

                                                           
Query: 484 taaatgagtgttttattagccaatcacttttttctaccattgtttgaa 531
           ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 362 taaatgagtgttttattagccaatcac-tttttctaccattgtttgaa 316


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 930
Length adjustment: 10
Effective length of query: 521
Effective length of database: 920
Effective search space:   479320
Effective search space used:   479320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)