Query= MSMg01no339_p01.b1 MSMg01no339_p01.b1 CHROMAT_FILE:
MSMg01no339_p01.b1 PHD_FILE: MSMg01no339_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:53 2005
(241 letters)
>mm_chr14_102906512_102907152
Length = 641
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%)
Strand = Plus / Plus
Query: 1 ctaaatgttcaatatgaaaacagcctcttgaacaaaagtgtgacacctggtgactcaggt 60
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ctaaatgttcaatatgaacacagcctcttgaacaaaagtgtgacaactggtgactcaggt 260
Query: 61 gagttagagcaaaacagaaatgctcactttggggatgcagtagataaaaggaacaggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagttagagcaaaacagaaatgctcactttggggatgcagtagataaaaggaacaggagc 320
Query: 121 agatgagtaatgcaatttaaatattcccctttctggtctcagtgggagaggatgtgtcta 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 321 agatgagtaatgcaatttaaatattcccttttctggtctcagtgggagaggatgtgccta 380
Query: 181 gtcctacagtaacttggtgtgccagaggggctttcccttctctgaaaaggggatggagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcctacagtaacttggtgtgccagaggggctttcccttctctgaaaaggggatggagga 440
Query: 241 t 241
|
Sbjct: 441 t 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no339_p01.g1 MSMg01no339_p01.g1 CHROMAT_FILE:
MSMg01no339_p01.g1 PHD_FILE: MSMg01no339_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:53 2005
(622 letters)
>mm_chr14_103068111_103069131
Length = 1021
Score = 814 bits (421), Expect = 0.0
Identities = 485/507 (95%), Gaps = 3/507 (0%)
Strand = Plus / Minus
Query: 118 gagggctgcctccgtgggcatggtgggaggtttagactgggccctaggttgctcttcaat 177
|||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1021 gagggctgcctccgtgagcatggtgggaggtttggactgggccctagtttgctcttcaat 962
Query: 178 agctgtaccagttatgaaaatgatgaccactaattgccaatagtttctcaaggacagg-- 235
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 961 agctgtaccagttatgaaaatgatgaccactaattgccaattgtctctcaaggacaggga 902
Query: 236 gggctagggacttgtgaacccctgtctgtcaatgatacaatgttggcagacccagacttg 295
||| | |||||| ||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 901 ggggtggggactcatgagcccctgtctgtcaatgatacaatgttggcagacccagtcttg 842
Query: 296 tggaggccttgtgcaggtaaaatgcatcactttagtctctttgggaagctctgctgggat 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tggaggccttgtgcaggtaaaatgcatcactttagtctctttgggaagctctgctgggat 782
Query: 356 cttttatgcatttttgtatagatttcccattgatctctttgtttttctagctcatttttt 415
|||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| ||
Sbjct: 781 cttttatgcatttttgtacagatttcccattgatctctttgcttttgtagctcatttgtt 722
Query: 416 tttccactcttacatgatggggagtctctggggctgacttttctgtgatgcagactggtc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tttccactcttacatgatggggagtctctggggctgacttttctgtgatgcagactggtc 662
Query: 476 ccctattccggggagacaggcacctttcacaggcccacttcatcttccctgttactcgcg 535
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccctactccggggagacaggcacctttcacaggcccacttcatcttccctgttactcgcg 602
Query: 536 agctttttgttttccaaacagatttactgtcattttcttcccaattccctctttgcaggt 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agctttttgttttccaaacagatttactgtcattttcttcccaattccctctttgcaggt 542
Query: 596 tcatgcttttattaatacgaaacagaa 622
|||||| |||| ||| || ||||||||
Sbjct: 541 tcatgc-tttagtaagacaaaacagaa 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1021
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1011
Effective search space: 618732
Effective search space used: 618732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
