CTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGCTATGACAATATGGCTATGGGGTAAATTTTTTTGGGGGGTAAG
TTTTTATAACTGCTTGTATTTCACCAGGAGTTATAATTGTGTTTTAATTG
CTTAGCTGATCTTGATTTAACAGGTAATGAAAAATTATCTATTTCTTTTA
GATTTTTCAATGTTTTGGAGTAAAGGGGGTTAGAACATGTCCTTATTATG
CTCTGAATTTCCTGGTATCTGTTATTATGACCCTCTTTCGATTTTGTTAT
GTTTCACTTTTGATTTTATTAATTTTGATATTCTCTATTAGCTTTTTAGT
TAATTTGAATAAAGAATTGTGTTTGTTTACTCAGAGAACTGACCCTCTGT
TTCATTGACTTTTTTGTTTGTCTCTGTCTTATTTATTTTACTCTGAGTTT
GGTTATTTTTTTTTCATCTGATCTATTTGTGTATGATTTCCTCTTTGTTG
TTTAAATTTGACATGCGTGTTGTATGTTACTAGTATGAGATCTCTCCAAT
TTTTTCTATGTAGGCACTTAGTACTATGAATTTGCATCTTAAAATCACAT
TTATTGTGCTCTACACATTTGTTGTGTTGAGTATTCACTTTCATACAATT
CTAAGAATTCTTTAATTTCTTTCTTAATTTCTGGCTTGAAGCATTTTTTG
GTCACTAGCCTGCTGTTCANTTTCTGGAGTTTGTAAACTTTCTGTG

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCACTGAAGGGGATGCAGAAAGG
CTGTAAGAGAATAGGTAATGAAGGAAATCAGGAGAATAAGCTTCTTTGAA
TTAACTATGCAAGGTGCATATGAGCTTACAGAGACTAAAGCAACAAGTAC
AAGGCCTATGTGGGTTGTACCAGGTTTGATAGATAGATAGATAGATAGAT
AGATAGATAGATAGATAGATAGAGAAATAGAGAACACTAATGGTTATTAG
ATACATTACATATTATATTATTGCATAATACCTTCACATGACCAAGAAAG
CTCATCTTTGCTCTGACTTCATCCACATCATTGAAAGCTCTATATTAACA
CTACCAAAATAGTAAGGATTAGGGACATTTTCATGACAGAGAAACATAAA
CATACCTAATTATTTCCATATCTCTGAACATTATAATATGTGTCTTACAT
AGACCAAGCCAGGTTATAAAAGGGGAGAAAAGCTGAAAGAAAATCATTTA
AATTTATTATATATTGATTCACAAAAATTAATTCATATACAATTTTAAAA
ACTGCTTTGTTTCATGGCAAAATGTAATGAAATGTGACGAATATGATCTA
TGTTTTGCTTCTTCCTGTAAGCTCTGGCCTTAGGTAACTCCCATAACTCA
ACTGTCCCTTAGTTTCTTTATATGAAACTGTANGGATTTCATTTTACTGT
T

Query= MSMg01no340_a08.g1 MSMg01no340_a08.g1 CHROMAT_FILE:
MSMg01no340_a08.g1 PHD_FILE: MSMg01no340_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:59 2005
         (556 letters)



>mm_chr14_40755336_40756291
          Length = 956

 Score =  632 bits (327), Expect = 0.0
 Identities = 518/615 (84%), Gaps = 61/615 (9%)
 Strand = Plus / Plus

                                                                       
Query: 1   cactgaaggggatgcagaaaggctgtaagagaataggtaatgaaggaaatcaggagaata 60
           |||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 151 cactgaaggggatgcaaaaaggctgtaagagcataggtaatgaaggaaatcagaagaata 210

                                                                       
Query: 61  agcttctttgaattaactatgcaaggtgcatatgagcttacagagactaaagcaacaagt 120
           || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 211 aggttctttgaattaactatgcaaggtgcatatgagcttacagagacaaaagcaacaagc 270

                                                                       
Query: 121 acaaggcctatgtgggttgtaccaggtttgatagatagatagatagatagatagatagat 180
           ||| ||||||||||||||||||||||||| ||| ||| ||| ||| ||| ||| ||| ||
Sbjct: 271 acagggcctatgtgggttgtaccaggttttatatatatatatatatatatatatatatat 330

                                                                       
Query: 181 a--------------ga------------------------tagatagatagagaaatag 202
           |              ||                        || ||| ||| | | ||||
Sbjct: 331 atatatataaaccatgaaccaaagcatatctctctctctcttatatatatatatatatag 390

                                                                       
Query: 203 aga---a-cacta------at--ggttattagatacattacatattatattattgcataa 250
           |||   | | |||      ||  | |||||||||| |||||||||||||| |||||||||
Sbjct: 391 agagagagcgctaaagcttattagattattagatatattacatattatatcattgcataa 450

                                                                       
Query: 251 taccttcacatgaccaagaaagctcatctttgctctgacttcatccacatcattgaaagc 310
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 taacttcacatgaccaagaaagctcatctttgctctgacttcatccacatcattgaaagc 510

                                                                       
Query: 311 tctatattaacactaccaaaatagtaaggattagggacattttcatgacagagaaacata 370
           ||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 511 tctatattagcactaccaaaatagtaaggatcagggacattttcatgacagtgaaacata 570

                                                                       
Query: 371 aacatacctaattatttccatatctctgaacattataatatgtgtcttacatagaccaag 430
           ||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||
Sbjct: 571 aacatacctaattatttctttatctctgaacattataatatgtgtcctacatagaccaag 630

                                                                       
Query: 431 ccaggttataaaa-----gggga---gaaaagctgaaagaaaatcatttaaatttattat 482
           |||| ||||||||     |||||   ||||| ||||||||||||||||||||||||||| 
Sbjct: 631 ccagattataaaaaaaggggggatgagaaaaactgaaagaaaatcatttaaatttattac 690

                                                                       
Query: 483 atattgattcacaaaaattaattcatatacaattttaaa-aactgctttgtttcatggca 541
           |||||||||||||||| |||||||||||||||||| ||| |||||||||| |||||||||
Sbjct: 691 atattgattcacaaaa-ttaattcatatacaattt-aaacaactgctttggttcatggca 748

                          
Query: 542 aaatgtaatgaaatg 556
           |||| ||||||||||
Sbjct: 749 aaatttaatgaaatg 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)