Query= MSMg01no340_j02.b1 MSMg01no340_j02.b1 CHROMAT_FILE:
MSMg01no340_j02.b1 PHD_FILE: MSMg01no340_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:36 2005
(387 letters)
>mm_chr14_47874933_47875720
Length = 788
Score = 659 bits (341), Expect = 0.0
Identities = 350/353 (99%), Gaps = 1/353 (0%)
Strand = Plus / Minus
Query: 5 gaattccattgtt-aattacttggtattatgaactatattagttggctggggatatagta 63
||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaattccattgttaaaatatttggtattatgaactatattagttggctggggatatagta 294
Query: 64 gtgcttgcttaacatgcaggcggtcctgaattccttctacagttcagggaatttattttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gtgcttgcttaacatgcaggcggtcctgaattccttctacagttcagggaatttattttt 234
Query: 124 taaagaaaagccttttgcgagtggtggcacagcactcagagggcagaaattggtatgtct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 taaagaaaagccttttgcgagtggtggcacagcactcagagggcagaaattggtatgtct 174
Query: 184 ctgtgtttgaggtcactgtagtctttaaagcaagtgtgggtcagccaggattatgtaatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ctgtgtttgaggtcactgtagtctttaaagcaagtgtgggtcagccaggattatgtaatg 114
Query: 244 agaccctgggtttggtttggtttggtttggtttggtttttgagactaaattagttaactt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 agaccctgggtttggtttggtttggtttggtttggtttttgagactaaattagttaactt 54
Query: 304 cttaattggtgttaggatgcatagctgtctttagaaatgtcttttatttctaa 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 cttaattggtgttaggatgcatagctgtctttagaaatgtcttttatttctaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 788
Length adjustment: 9
Effective length of query: 378
Effective length of database: 779
Effective search space: 294462
Effective search space used: 294462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_j02.g1 MSMg01no340_j02.g1 CHROMAT_FILE:
MSMg01no340_j02.g1 PHD_FILE: MSMg01no340_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:36 2005
(549 letters)
>mm_chr14_47685071_47686019
Length = 949
Score = 1062 bits (549), Expect = 0.0
Identities = 549/549 (100%)
Strand = Plus / Plus
Query: 1 actggatccgaaaagtacagcaaaacagaaatatatccccagtgcttgcaagggcagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actggatccgaaaagtacagcaaaacagaaatatatccccagtgcttgcaagggcagaga 260
Query: 61 tgcccctgccaccctctgcccttcactagtgaaggagaaactctagaatggttgccaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcccctgccaccctctgcccttcactagtgaaggagaaactctagaatggttgccaggg 320
Query: 121 aacagagatggccagaacgctgcattagagacctgcttagaaaaaagggaccctttttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacagagatggccagaacgctgcattagagacctgcttagaaaaaagggaccctttttac 380
Query: 181 tgggaagtgtgtagcgactacaatccacaagattctaaggaagtccccccctccccctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggaagtgtgtagcgactacaatccacaagattctaaggaagtccccccctccccctga 440
Query: 241 ctgctgtggccagtttaaaataaaaaatccacaactctgcatgcttacctagagtgaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgctgtggccagtttaaaataaaaaatccacaactctgcatgcttacctagagtgaagt 500
Query: 301 aaattccacttttcataatggaaaggaaaaggatggtcgtaaaggaacagaattcccctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaattccacttttcataatggaaaggaaaaggatggtcgtaaaggaacagaattcccctg 560
Query: 361 tgtggtggttggtgcacatgggcggtactgggcttcacgtcctttgccccaagaaagcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtggtggttggtgcacatgggcggtactgggcttcacgtcctttgccccaagaaagcaa 620
Query: 421 aaaacaacaatactgcagtctccagagaaaccaagagggactgaagtaagacaacctgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaacaacaatactgcagtctccagagaaaccaagagggactgaagtaagacaacctgaa 680
Query: 481 gacaggagtgtcctgaacaaaaccaaaaaggtcatttaacatggtgaaagtgaagacatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacaggagtgtcctgaacaaaaccaaaaaggtcatttaacatggtgaaagtgaagacatc 740
Query: 541 tcacactgg 549
|||||||||
Sbjct: 741 tcacactgg 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
