Query= MSMg01no342_c12.b1 MSMg01no342_c12.b1 CHROMAT_FILE:
MSMg01no342_c12.b1 PHD_FILE: MSMg01no342_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:36 2005
(465 letters)
>mm_chr14_71509923_71510789
Length = 867
Score = 783 bits (405), Expect = 0.0
Identities = 445/463 (96%), Gaps = 10/463 (2%)
Strand = Plus / Plus
Query: 5 gaattctgtgttctcgcctgtgtaagtttcttagtgttttatttattctttgaaaactac 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtgtgcttgcctgtgtaagtttcttagtgttttatttattctttgaaaactac 264
Query: 65 ataatttatgcaatgcactttgaccatattcatgttcctcccttcaactcccccagacac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataatttatgcaatgcactttgaccatattcatgttcctcccttcaactcccccagacac 324
Query: 125 ctcccatcctcctctcaattttttgtcttacatttttgatattaatatttgatattaacg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 ctcccatcctcctctcaattttttgtcttacatttttgatattaatatttgatattaatg 384
Query: 185 cccctaggctcagggagtgctgtccatgtgaacatggtgtgggcctatgcctttgatgct 244
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccctaggctcagtgagtgctgtccatgtgaacatggtgtgggcctatgcctttgatgct 444
Query: 245 agattacagattttttt--cttgtatgtttgggaggctacaggctttggatgctgatgct 302
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agattacagatttttttttcttgtatgtttgggaggctacaggctttggatgctgatgct 504
Query: 303 cttttttatttaagttttttaaagtttgaaattaagatgcaattacaacacttatttctt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttttttatttaagttttttaaagtttgaaattaagatgcaattacaacacttatttctt 564
Query: 363 tctcttttctccttccactgtttcccatgtatctttcattgctctctctctctctctcaa 422
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 tctcttttctccttccactgtttcccatgtatctttcattgctctctctctc------aa 618
Query: 423 attcttgtcatctggcctttttaaaaaatgttttacacacaca 465
||||| | ||||||| ||||| |||||||||| |||||||||
Sbjct: 619 attctggacatctggtcttttaaaaaaatgtt--acacacaca 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 867
Length adjustment: 10
Effective length of query: 455
Effective length of database: 857
Effective search space: 389935
Effective search space used: 389935
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_c12.g1 MSMg01no342_c12.g1 CHROMAT_FILE:
MSMg01no342_c12.g1 PHD_FILE: MSMg01no342_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:36 2005
(429 letters)
>mm_chr14_71641025_71641848
Length = 824
Score = 781 bits (404), Expect = 0.0
Identities = 420/428 (98%), Gaps = 5/428 (1%)
Strand = Plus / Minus
Query: 1 ccagggttaaaagctaaggagaagacataaggacgagacacctagcccactgcttcagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 623 ccagggttaaaagctaaggagaagacataaggacgagacacctagcccactacttcagcc 564
Query: 61 tgccctgagcagctgcctcaccaggccatatgagacaggttagagttgaaaactctttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgccctgagcagctgcctcaccaggccatatgagacaggttagagttgaaaactctttgt 504
Query: 121 cctgacgcttgtgtaaggtctgcaaaggaggacagactgacaaatggacaatgcaggctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cctgacgcttgtgtaaggtctgcaaaggaggacagactgacaaatggacaatgcaggctt 444
Query: 181 tactcaggaaagaagatgccgagggggtctttagtgcaaagagcagagtctgccctttcc 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tactcaggaaaggagatgccgagggggtctttagtgcaaagagcagagtctgccctttcc 384
Query: 241 tctcaggcttagtggcagagggtagaaagggggagtggggaaagaagagtgaatagtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tctcaggcttagtggcagagggtagaaagggggagtggggaaagaagagtgaatagtttt 324
Query: 301 cttttcttttcttgtttttttggtcctgggtaggtcgttgctaggggggcggtagggtgt 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cttttctt-----gtttttttggtcctgggtaggtcgttgctaggggggcggtagggtgt 269
Query: 361 gtgctgaactgaagagtgtcagagaagcatctttcctgtcctagggaatggtaaggggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 268 gtgctgaactgaagagtgtcagagaagcatctttcctgtcctagggaatggtaagggatg 209
Query: 421 aggattaa 428
||||||||
Sbjct: 208 aggattaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 824
Length adjustment: 9
Effective length of query: 420
Effective length of database: 815
Effective search space: 342300
Effective search space used: 342300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
