Query= MSMg01no342_o12.b1 MSMg01no342_o12.b1 CHROMAT_FILE:
MSMg01no342_o12.b1 PHD_FILE: MSMg01no342_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:33 2005
(466 letters)
>mm_chr14_12324719_12325584
Length = 866
Score = 886 bits (458), Expect = 0.0
Identities = 464/466 (99%)
Strand = Plus / Plus
Query: 1 ttttgactcttccactttgggtcatgaactacttggaagtatgtgtttaatctatgtgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttgactcttccactttgggtcatgaactacttggaagtatgtgtttaatctatgtgta 260
Query: 61 ttagtgaatttcctgttatatctatttcactggtctctacattagttcttttgcaataac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagtgaatttcctgttatatctatttcactggtctctacattagttcttttgcaataac 320
Query: 121 tgaacatactttgtaaaagttttttacttgtttggtgtgctaggaattgaattagagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaacatactttgtaaaagttttttacttgtttggtgtgctaggaattgaattagagcct 380
Query: 181 tgagcagaggaggcaagcacagcttgatgctgcattgcaatcccttctgttgaacacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagcagaggaggcaagcacagcttgatgctgcattgcaatcccttctgttgaacacact 440
Query: 241 gacacccttctaaacctaggacacagcctgtcctgatgaaagttcaagagatgctttgtc 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacgcccttctaaacctaggacacagcctgtcctgatgaaagttcaagagatgctttgtc 500
Query: 301 ttgtattccatggcaggggcgtccaaactttggcaatgtgacatgacattatttacaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtattccatggcaggggcgtccaaactttggcaatgtgacatgacattatttacaaat 560
Query: 361 atgttggtctggattcatagcagttcagggatatatgcaattttaattatagaatgatgt 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtcggtctggattcatagcagttcagggatatatgcaattttaattatagaatgatgt 620
Query: 421 aatttctatcaatcaccaaatgttgtttatagaaatctatgggcac 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatttctatcaatcaccaaatgttgtttatagaaatctatgggcac 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_o12.g1 MSMg01no342_o12.g1 CHROMAT_FILE:
MSMg01no342_o12.g1 PHD_FILE: MSMg01no342_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:33 2005
(293 letters)
>mm_chr14_12510339_12511032
Length = 694
Score = 514 bits (266), Expect = e-150
Identities = 287/294 (97%), Gaps = 1/294 (0%)
Strand = Plus / Minus
Query: 1 accctggcactacttcccaagctatcgatccaggctaacaggccctctggagcactgcag 60
||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 494 accctggcactgcttcccaagctagcgatccaggctaacaggccctctggaccactgcag 435
Query: 61 acacacagaatgtccattcaacatagagactgagattacaggttagtatacgaggttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 acacacagaatgtccattcaacatagagactgagattacaggttagtatacgaggttgct 375
Query: 121 ttttgtccattaactgtctgggtagtaacccatcacacaaacaggtctcctttaaaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttttgtccattaactgtctgggtagtaacccatcacacaaacaggtctcctttaaaatct 315
Query: 181 cctagcgatgggtactgaggtcatttcaagtctcacggcagtccagggaagcttttcac- 239
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cctagcaatgggtactgaggtcatttcaagtctcacggcagtccagggaagcttttcaca 255
Query: 240 cttatacctcagtgaggtaagagggttcttccacaagataaactccctgaaaat 293
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cagatacctcagtgaggtaagagggttcttccacaagataaactccctgaaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 694
Length adjustment: 9
Effective length of query: 284
Effective length of database: 685
Effective search space: 194540
Effective search space used: 194540
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
