Query= MSMg01no343_c12.b1 MSMg01no343_c12.b1 CHROMAT_FILE:
MSMg01no343_c12.b1 PHD_FILE: MSMg01no343_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:52 2005
(509 letters)
>mm_chr14_90788437_90789345
Length = 909
Score = 969 bits (501), Expect = 0.0
Identities = 504/505 (99%)
Strand = Plus / Minus
Query: 5 gaattcttcaaggatccacttgtcttggtggatattgaatccgtagcatatgccagtttt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gaattcttcaaggacccacttgtcttggtggatattgaatccgtagcatatgccagtttt 650
Query: 65 tacttattggaaaaatattacaatgatttaggagagaaagacaaaattttaatgattgaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tacttattggaaaaatattacaatgatttaggagagaaagacaaaattttaatgattgaa 590
Query: 125 atatcttttcctgaaagagattcaactttaaattttttgtgataatattaatatttgact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 atatcttttcctgaaagagattcaactttaaattttttgtgataatattaatatttgact 530
Query: 185 gtaggatagctaggatttgagaaaaggttaggatattgttttcttttcttatttataaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gtaggatagctaggatttgagaaaaggttaggatattgttttcttttcttatttataaca 470
Query: 245 ttacacatagttatgatacacgtgaataagatcaaggaccttacttattgatcaggcatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttacacatagttatgatacacgtgaataagatcaaggaccttacttattgatcaggcatt 410
Query: 305 aagaaaggtactgttaagtatttaaaaatcaaatttatatgaacaataaattctctttgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aagaaaggtactgttaagtatttaaaaatcaaatttatatgaacaataaattctctttgg 350
Query: 365 ggatatttcttctgagatttattgtagtgcaaataagcaaaatatgttttgttgtgtacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ggatatttcttctgagatttattgtagtgcaaataagcaaaatatgttttgttgtgtacc 290
Query: 425 agtcaaactccttcattgaaaactgttagatattactactttaattggcagcctaaatct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 agtcaaactccttcattgaaaactgttagatattactactttaattggcagcctaaatct 230
Query: 485 gggtgaaagcagccccaaaatgagg 509
|||||||||||||||||||||||||
Sbjct: 229 gggtgaaagcagccccaaaatgagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_c12.g1 MSMg01no343_c12.g1 CHROMAT_FILE:
MSMg01no343_c12.g1 PHD_FILE: MSMg01no343_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:52 2005
(399 letters)
>mm_chr14_90621110_90621908
Length = 799
Score = 760 bits (393), Expect = 0.0
Identities = 399/403 (99%), Gaps = 4/403 (0%)
Strand = Plus / Plus
Query: 1 cttttgctaagagcacatttaagggaactaagatgggactgcctatttcatgtctttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttgctaagagcacatttaagggaactaagatgggactgcctatttcatgtctttcat 260
Query: 61 ttcaatatgtgccagaataaacttttacatttttgtagacttatgagtcccctattaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaatatgtgccagaataaacttttacatttttgtagacttatgagtcccctattaata 320
Query: 121 ttttccagaaaccagaaaaaataaatcttctgttatcatctgtatctatgttttatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttccagaaaccagaaaaaataaatcttctgttatcatctgtatctatgttttatatat 380
Query: 181 catctaacatgtatctataatttgtgtatctgtatttatgaatttgactatctatcatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catctaacatgtatctataatttgtgtatctgtatttatgaatttgactatctatcatct 440
Query: 241 atctatctatctatctatctatctatct----ttgtgtctatcatcatctatctagtcca 296
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 atctatctatctatctatctatctatctatctttgtgtctatcatcatctatctagtcca 500
Query: 297 cctatcatttctgtattatttatacactttggacaacaccttatctgattattgatgact 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctatcatttctgtattatttatacactttggacaacaccttatctgattattgatgact 560
Query: 357 aatataatctaggggagacatttttattttaacttactgaagt 399
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatataatctaggggagacatttttattttaacttactgaagt 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|