Query= MSMg01no344_e01.b1 MSMg01no344_e01.b1 CHROMAT_FILE:
MSMg01no344_e01.b1 PHD_FILE: MSMg01no344_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:22 2005
(272 letters)
>mm_chr14_84105947_84106618
Length = 672
Score = 418 bits (216), Expect = e-121
Identities = 252/264 (95%)
Strand = Plus / Plus
Query: 5 gaattcctgcattgccttcaataggtttgatatttatcgttaaaggctaaataaattaga 64
||||||||||| || ||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 205 gaattcctgcactgttttcaataggtttgatatttttctttaaaggctaaataaattaga 264
Query: 65 atcttaagttataaaaatgttgctattctcacatatgtagttatgtaggtttgaaactat 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 265 atcttaagttataaaaatgttgctattctcacatatgtagttatgtaggtttgaaactct 324
Query: 125 gtatgttgttatgtgtttatataggcccaaatatagtaggaattaatctgtgtgtaggac 184
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 gtatgtggttatgtgtttatataggcccaaatataataggaattaatctgtgtgtaggac 384
Query: 185 tgggaattctttcatgttattatcaaaaaatatacagcgaacacaatatacatttaaaaa 244
||| |||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 385 tggaaattatttcatgttattagcaaaaattatacagcgaacacaatatacatttaaaaa 444
Query: 245 tttaaatatattagcatcctgttt 268
||||||||||||||||||||||||
Sbjct: 445 tttaaatatattagcatcctgttt 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no344_e01.g1 MSMg01no344_e01.g1 CHROMAT_FILE:
MSMg01no344_e01.g1 PHD_FILE: MSMg01no344_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:22 2005
(184 letters)
>mm_chr14_84284784_84285367
Length = 584
Score = 335 bits (173), Expect = 1e-96
Identities = 182/185 (98%), Gaps = 2/185 (1%)
Strand = Plus / Minus
Query: 1 ataccttgaaatgcaagcaaagagcagagagtaggctgtaagtgttgggagactttcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataccttgaaatgcaagcaaagagcagagagtaggctgtaagtgttgggagactttcaat 325
Query: 61 ttgaaag-cccttcccagtaaaacatgctagctagcgacactgctccacctaaccttcaa 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttgaaagccccttcccagtaaaacatgctagctagcgacactgctccacctaaccttcaa 265
Query: 120 actaacctgaaacgaagtgctcaaatttataagactttggaaaatatgatgagttcttat 179
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 actaacctgaaacaaagtgctcaaatttataagactttggaaaatatgat-agttcttat 206
Query: 180 taaaa 184
|||||
Sbjct: 205 taaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
