XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTG
TTTATGTCCTCTACCATCATCATGAGATATGCTTTTAAATCCAGGTCTAC
CTTTTCAGGTGTGTTAGGGTGTCCTGGATTGGGCGAAGTGGGCGTTCTGG
GTTCTGATGATGGTGAGTGGTCCTGGCTTCTGTTAGTAGGATTCTTACGT
TTACCTTTCGCCATCTGGCAATCTCTGGAGTTAGTTGTTATAGTTGTCTT
TGTTAAAAGATTGTTCCTCTGTTGATTTTGTTACCCTCTATCAGCAGGCG
TGGGAGACAAGCTCTCTTCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGT
AGGCAAGCTCTCCTCTCTCAGGGAAGGTGTACAGTTATCTGGTGTTTGGA
CCTCCTCCTGGCTGAAGGTGAAGGCCCTGAACATGATCTTTCCCAGAAGC
TGTGTTGCTTTGGCCAGGAAGGTGGCCAGTTGTCTGGTGTCCAAGATGTC
TCAGCCTCAGAATCTCTGTGGCTCTTGTCGGCAAGGCGGTTGGGTTGCCT
GTATCTGAGGATTGTGTCCTCCCCTGAACTCTTTCGATCCTTTTAGCTCT
TTCCCTTAAAATATTCGTTTTTTTTTGTTCCTCCCCGTTCACTCCGTGTT
ATCCTTCTTTCTTTCGTAAGCCCGCGGGCACCTATTATATCCTTCTTCAT
CTTTTTGTTTTTTATATCCTCTTTTTTTCCCCTTTCAATTCTCCTCCCCT
CTTCATTTTATTTTTTTGATCCTCCTGTCTTN

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCCTGAGTTCGGGAATTCAAATCACTAGA
CCCTACACTGTGTGGGTTAGCCCATATTAGCAAGTTCTGAATAATGCAAG
AGACTTTAGCAAATATAATGAAAAGTGATCTGGTACGGTTTCTGATCTCA
TCCTCATGCCTCCATGTGTGCATCCATGTATACATCCACCACCCAAACAC
TTGCACACATATAAACACCACACATACACACACATATGCAAATTACACAC
ACACACACACACACACACACACACACACAAATTCCCCATAGGAACTGACC
TGTCTTTCTGCTTCAGGTGAAACTTGACATGAGCAATTAACAAACTACTT
TTGGTCTTCTGTTCCCCTTACCATCATGAAGTTAATGCAAGGCTTTTGGA
GAGGCCCCATGTCTATGGTGACTGAGCAGAACATTTTCATCATTACTGAT
CTCTCCTTTGTCTTCAGTCACCTGCTCACTTGAATGACACAGGATTTGGG
CCTGGGGAGTTAAGAGGAGAAGGAAGAAGGCTTGGGAGGAAATGTGCACA
CACACAGGGAAATGAGGGGGCCTTTGCATTAACATTTTGGTTATTCTGCT
TTTTTGAAGACTGCAATACCCTTTCCCGGAAAAGAAAATGTAAGGGATCC
TTCTTTTATTAAAAAAGGAGGAAGGTGGAAAGGACCCCAACTTTTCCTTG
GAACTCACTGGGTT

Query= MSMg01no344_h19.g1 MSMg01no344_h19.g1 CHROMAT_FILE:
MSMg01no344_h19.g1 PHD_FILE: MSMg01no344_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:41 2005
         (482 letters)



>mm_chr14_13598628_13599511
          Length = 884

 Score =  578 bits (299), Expect = e-169
 Identities = 373/427 (87%), Gaps = 46/427 (10%)
 Strand = Plus / Minus

                                                                       
Query: 102 agtgatctggtacggtttctgatctcatcctcatgcctccatgtgtgcatccatgtatac 161
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 agtgatctggtacggtttctgatctcatcctcatgcctccatgtgtgcatccatgtatac 825

                                                                       
Query: 162 atccaccacccaaacacttgcacacatataaacaccacacatacacacacatatgcaaat 221
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 atccaccacccaaacacttgcacacatataaacaccacacatacacacacatatgcaaat 765

                                                                       
Query: 222 tacacacacacacacacacacacacacac------------------------------- 250
           |||||||||||||||||||||||||||||                               
Sbjct: 764 tacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca 705

                                                                       
Query: 251 -------------acacacaaattccccataggaactgacctgtctttctgcttcaggtg 297
                        ||||||||||||||||||||||| ||||  |||||||||||||||||
Sbjct: 704 catacacacacagacacacaaattccccataggaacagacccatctttctgcttcaggtg 645

                                                                       
Query: 298 aaacttgacatgagcaattaaca--aactacttttggtcttctgttccccttaccatcat 355
           ||||||| ||||||||||| |||  ||||||||||||||||||||| |||||||||||| 
Sbjct: 644 aaacttggcatgagcaattgacaacaactacttttggtcttctgtttcccttaccatcag 585

                                                                       
Query: 356 gaagttaatgcaaggcttttggagaggccccatgtctatggtgactgagcagaacatttt 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gaagttaatgcaaggcttttggagaggccccatgtctatggtgactgagcagaacatttt 525

                                                                       
Query: 416 catcattactgatctctcctttgtcttcagtcacctgctcacttgaatgacacaggattt 475
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 catcattactgatccctcctttgtcttcagtcacctgctcacttgaatgacacaggattt 465

                  
Query: 476 gggcctg 482
           |||||||
Sbjct: 464 gggcctg 458


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 884
Length adjustment: 10
Effective length of query: 472
Effective length of database: 874
Effective search space:   412528
Effective search space used:   412528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)