XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CAAATTATTCCGTTAATATGCTCAACCTCCAAAATAAAAAATAAAATAGA
ATCATTAAATTAACAACTGCATATGGAATCAATATTTTAAATATTTAATT
TAAGGAAGGAATTTGGTTTCATGTTCCAAAGAAATGAAAATGGAATATAA
CTTGGAAAAAATGTGTTTTCAGGTTGTTTTGAGTTAAAACAATATCTTTC
AGTGATTAAGTTCTTGGTCCAGTCTCTAAAATCATACAAACACGAATTCT
AGCTTTCTGCAAAAGAAATGACTTTCATGATGTATACCAGGAATACATAC
TAATATATAAATATGAGTTTAAGAGTGCAAAATAAAGTACATAAAAGGAA
ATATAGAATCATTAAAGTCACAAGTATCAGGGCCCTTAAAAACCATCGCC
AAAATACGTTTCTTATTTCAAGGAGAGTCAAGGATCAAAAGTAAAGCAGT
ATCATTAACATAAAAAGGAAACAAAACATAAGCATAGTAAATGTTGAAAA
GAAAAACAATGCATTAGTGAGTACAAAGTCAGGTAAATAATATATTTTGA
TTTTTAAAACATTTTGTTCTAATTTGATAAGATATTTGGACATTACACTG
TAAATAATAAAGTTCATGAACATGTATAGTTTTTCTTATAAAACCAGGGC
AATCTATTTTCCAACATTTATTTATTGTTGACCTN

ACGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGACAGGGAAGAAGAAGTGGG
GAGAGGGGATTTTTGTCAGGTAAATGAGGGAAGGGAGATAACATTTGAAA
CATAAATAAAGAAAATAGTGAAAAGGAAAAAGAGAAGAGAAGAGAAGAGA
AGAGAAGAGAAGAGAAGAGAAGAGAGGAGAGGAGAGGAGAGGAGAGGAGA
GGAGAGGATAGGTTTNCTCCCGCTTTTTTCTTTCCTGTTTTTTGCCCGGT
TGTTCCTTGCGCCAGCGCCCCAATTTTTTTTTCTATATTTTCCTATCGCA
TATCTATACATTTTATTTGGGCCCCTCTTATCTTAAAACAGCGTCTAATT
TTCTGTTTTTACCTATCTTTAGTGCCCCCCCCTCCCGAAGGGTAATAGCT
TAGGTCTGTTCTTACTTTCTCGTCCTCTCCTTCATCCCGCTTTTTTCCAA
TCTATTCTCCTTTCCCCCAATCGCCTATAACTTTTTCCCTATACCACCCG
CTCCTACTTTTTCCATTTAATCTTTCCTTTTACTCTCACCCTTTTTTACC
TTTTTCCTTTCTCTCCCCTTTTTTGAACATATTTCCCCCACTACTTTACT
TACCCCGCTCGACCCTTTCTTTTTTTCCCTCCTTTTTTACCCCTTATCTT
GGTCTTTGCCCCCAGTTCACCCACTTTTTCCATTCCGCCCCTAATAATTC
TACTTTCTTCACCCTCCCCCGCATTTTTCTCTTCTCTCG

Query= MSMg01no344_p05.b1 MSMg01no344_p05.b1 CHROMAT_FILE:
MSMg01no344_p05.b1 PHD_FILE: MSMg01no344_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:17 2005
         (614 letters)



>mm_chr14_111411845_111412857
          Length = 1013

 Score = 1038 bits (537), Expect = 0.0
 Identities = 591/613 (96%), Gaps = 10/613 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaattattcc---gttaatatgctcaacctccaaaataaaaaataaaatagaat 61
           ||||||||||||   |   ||||||||||||||| ||||||||||||||   ||||||||
Sbjct: 208 gaattcaaatta---cagtgttaatatgctcaacatccaaaataaaaaa---aatagaat 261

                                                                       
Query: 62  cattaaattaacaactgcatatggaatcaatattttaaatatttaatttaaggaaggaat 121
           |||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cattaatttaagaactgcatagggaatcaatattttaaatatttaatttaaggaaggaat 321

                                                                       
Query: 122 ttggtttcatgttccaaagaaatgaaaatggaatataacttggaaaaaatgtgttttcag 181
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 322 ttggtttcatgttccaaagaaatgaaaatggaatataacttggaaaaa-tgtgttttcag 380

                                                                       
Query: 182 gttgttttgagttaaaacaatatctttcagtgattaagttcttggtccagtctctaaaat 241
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 gttgttttgagttaaaacaatatctttcagtgattaagctcttggtccagtctctaaaat 440

                                                                       
Query: 242 catacaaacacgaattctagctttctgcaaaagaaatgactttcatgatgtataccagga 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catacaaacacgaattctagctttctgcaaaagaaatgactttcatgatgtataccagga 500

                                                                       
Query: 302 atacatactaatatataaatatgagtttaagagtgcaaaataaagtacataaaaggaaat 361
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 atacatactaatatataaatatgagtttaagagtgcaaaataatgtacataaaaggaaat 560

                                                                       
Query: 362 atagaatcattaaagtcacaagtatcagggcccttaaaaaccatcgccaaaatacgtttc 421
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 atataatcattaaagtcacaagtatcagggcccttaaaaaccatcgccaaaatacctttc 620

                                                                       
Query: 422 ttatttcaaggagagtcaaggatcaaaagtaaagcagtatcattaacataaaaaggaaac 481
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttatttcaaggagattcaaggatcaaaagtaaagcagtatcattaacataaaaaggaaac 680

                                                                       
Query: 482 aaaacataagcatagtaaatgttgaaaagaaaaacaatgcattagtgagtacaaagtcag 541
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 aaaacataagcatagtaaatgttgaaaagaaaaacaatgcattagtgaatacaaagtcag 740

                                                                       
Query: 542 gtaaataatatattttgatttttaaaacattttgttctaatttgataagatatttggaca 601
           |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 741 gtaaataatatattctgatttttaaaacattttgttctaatttgataaaatatttggaca 800

                        
Query: 602 ttacactgtaaat 614
           |||||||||||||
Sbjct: 801 ttacactgtaaat 813


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1013
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1003
Effective search space:   605812
Effective search space used:   605812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)