Query= MSMg01no346_b16.b1 MSMg01no346_b16.b1 CHROMAT_FILE:
MSMg01no346_b16.b1 PHD_FILE: MSMg01no346_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:42 2005
(444 letters)
>mm_chr14_51505632_51506475
Length = 844
Score = 835 bits (432), Expect = 0.0
Identities = 440/444 (99%), Gaps = 3/444 (0%)
Strand = Plus / Plus
Query: 1 gatgcttaagcatagacgacctcaaagcctacccccacagtgacatacttcctccaacaa 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 204 gatgcttaagcacagacgacctcaaagcctacccccacagtgacatacttcctc---caa 260
Query: 61 ggccacacctaccccaacatggctgcacctcctaatcgtgccactctccatgggccaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccacacctaccccaacatggctgcacctcctaatcgtgccactctccatgggccaaac 320
Query: 121 tttcaaacacgtgaccctatgggggccaaacctattcaaaccaccatagttggtgaaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcaaacacgtgaccctatgggggccaaacctattcaaaccaccatagttggtgaaccc 380
Query: 181 ttaacccctaaatacttcagacccagttggagtccatatgaacctacagccttacctcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaacccctaaatacttcagacccagttggagtccatatgaacctacagccttacctcag 440
Query: 241 agtgctattagactggagtatgatgctcacctcagaggcttgccacaacatactgaccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgctattagactggagtatgatgctcacctcagaggcttgccacaacatactgaccac 500
Query: 301 tgtgcttggcattgttgatctaaaaggacttggcctgtgaacttgatttgtggcctatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgcttggcattgttgatctaaaaggacttggcctgtgaacttgatttgtggcctatag 560
Query: 361 aggccactttttcaaatctgcctccatatttgtggtaacattgtagtgtttatagtatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggccactttttcaaatctgcctccatatttgtggtaacattgtagtgtttatagtatag 620
Query: 421 gccattatagtataagccagtatt 444
||||||||||||||||||||||||
Sbjct: 621 gccattatagtataagccagtatt 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_b16.g1 MSMg01no346_b16.g1 CHROMAT_FILE:
MSMg01no346_b16.g1 PHD_FILE: MSMg01no346_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:42 2005
(520 letters)
>mm_chr14_51685394_51686314
Length = 921
Score = 992 bits (513), Expect = 0.0
Identities = 519/521 (99%), Gaps = 1/521 (0%)
Strand = Plus / Minus
Query: 1 tcttaaatgtgtaatggaaaaccataaaggaagataaatcagtccctgcagagaatggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcttaaatgtgtaatggaaaaccataaaggaagataaatcagtccctgcagagaatggaa 662
Query: 61 gagagcccaccaaactgtggccaggtggggatgagtagtattgcggggaaacagaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagagcccaccaaactgtggccaggtggggatgagtagtattgcggggaaacagaaagga 602
Query: 121 gccaaggaccagaggatgatgggagagaagaaagagcaagaagggaaggagggagggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccaaggaccagaggatgatgggagagaagaaagagcaagaagggaaggagggagggcag 542
Query: 181 ttttgattgaggctgattttgtctaaacccactctctgaaaattatagcagtaaagatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttttgattgaggctgattttgtctaaacccactctctgaaaattatagcagtaaagatga 482
Query: 241 c-aaaaaaaaaaaaccctataataatgggcacttatttctgaaaaagtacactacatagc 299
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaaaaaaaaaaaaccctataataatgggcacttatttctgaaaaagtacactacatagc 422
Query: 300 taaccaaatgatatagtaatttacagtcttaaagaacgaaccttgtgactttcttggggg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaccaaatgatatagtaatttacagtcttaaagaacgaaccttgtgactttcttggggg 362
Query: 360 tgtagtggccagggccacctagaaagtctgaggaccggtggccgggcagtgctgggagac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtagtggccagggccacctagaaagtctgaggaccggtggccgggcagtgctgggagac 302
Query: 420 gcaggtctaagcaagccaacaaagaccccgcttgcccggctctgtgcacaggacagcttg 479
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcgggtctaagcaagccaacaaagaccccgcttgcccggctctgtgcacaggacagcttg 242
Query: 480 gtgagacctctgtagactcaaacccggatcaagaacatctg 520
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgagacctctgtagactcaaacccggatcaagaacatctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 921
Length adjustment: 10
Effective length of query: 510
Effective length of database: 911
Effective search space: 464610
Effective search space used: 464610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
