Query= MSMg01no347_a13.b1 MSMg01no347_a13.b1 CHROMAT_FILE:
MSMg01no347_a13.b1 PHD_FILE: MSMg01no347_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:53 2005
(499 letters)
>mm_chr14_79597351_79598249
Length = 899
Score = 919 bits (475), Expect = 0.0
Identities = 493/499 (98%)
Strand = Plus / Plus
Query: 1 agaaaggaaaagaaatggctcctttcagggaactttatatttttaactttatatttctgt 60
|||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 201 agaaaggaaaagaaatggctcctttcagggtactttatatttcaaattttatatttctgt 260
Query: 61 tggtaattttgagtgataaattcagtctcatatacttaaacctgcaggagacaccatgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtaattttgagtgataaattcagtctcatatacttaaacctgcaggagacaccatgat 320
Query: 121 cttaaaacagattgcctcctttgccacagaaagcagtgttcagcatcggattaacttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttaaaacagattgcctcctttgccacagaaagcagtgttcagcatcggattaacttgtt 380
Query: 181 tactggaaattcagcccgctccttattttgctcctacatcttgcccctctcccagatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tactggaaattcagcccgctccttattttgctcctacatcttgcccctctcccagatgat 440
Query: 241 accaattacatattttcttactttaaatagaaggttgaattgtaaaagtgtcaattgtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accaattacatattttcttactttaaatagaaggttgaattgtaaaagtgtcaattgtga 500
Query: 301 acatttgggagcattgcctgtttctaagaaaagtcaaccccatacaacactccctgtgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acatttgggagcattgcctgtttctaagaaaagtcaaccccatacaacactccctgtgcc 560
Query: 361 ctgttgtctctcagtacgtaatcaaacagcaggcagtagtctgtcgatacaaaaatcatc 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgttgtctctcagcacgtaatcaaacagcaggcagtagtctgtcgatacaaaaatcatc 620
Query: 421 acgtttgttgaaaaggagatgctcacctgtggtctctgcgcccacctcttacctgcagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acgtttgttgaaaaggagatgctcacctgtggtctctgcgcccacctcttacctgcagac 680
Query: 481 gatgcacgcgcactctcag 499
|||||||| ||||||||||
Sbjct: 681 gatgcacgagcactctcag 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_a13.g1 MSMg01no347_a13.g1 CHROMAT_FILE:
MSMg01no347_a13.g1 PHD_FILE: MSMg01no347_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:53 2005
(552 letters)
>mm_chr14_79780414_79781363
Length = 950
Score = 967 bits (500), Expect = 0.0
Identities = 539/552 (97%), Gaps = 2/552 (0%)
Strand = Plus / Minus
Query: 1 ccagtataaaataaactaattcttaagttttatgagcagtaatctcaatactctgataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ccagtataaaataaactaattcttaagttttatgagcagtaatctcaatactctgataga 691
Query: 61 taaagaaataaaataagatgactgtagtggagcttgggaagagggcttgtcttgtaggtt 120
|| |||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 690 tacagaaat-aaatatgatgactgtagtggagcttgggaagagggcttgtctcgtaggtt 632
Query: 121 gtgttatgggcgcatagccctaactagaaaaaaaatagtaaaatataaagaatttggaag 180
||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 631 gtgttatgggcacatagctctaactag-aaaaaaatagtaaaatataaagaatttggaag 573
Query: 181 ctagaggattatttctgtgatatatattactttagttgtggatatggaaatggtatgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctagaggattatttctgtgatatatattactttagttgtggatatggaaatggtatgtgt 513
Query: 241 ggttttgttttatgttaatgtatttggaatatctagaatacttaacctgttttataaaaa 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gtttttgttttatgttaatgtatttggaatatctagaatacttaacctgttttataaaaa 453
Query: 301 tacaaagcatgttaactcatttacatatgttaacattttctgtaattgttaaaggtttta 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 452 tacaaagcatgttaactcatttacatatgttaacattttctataattgttaaaggtttta 393
Query: 361 cttaaaaaataaaatatgtagaagtagcttaagttttttctgcacctttccagatgtaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cttaaaaaataaaatatgtagaagtagcttaagttttttctgcacctttccagatgtaag 333
Query: 421 cactaatctgaaattagtacagagataacttttcatatgtatgccatgcataaatctacc 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 332 cactaatctgaaattagtacagagataacttttcatatgtatgccgtgcataaatctacc 273
Query: 481 aaagatacagacttgtgtatatgtttttagaatttacatgatagtttttgtttttaagtc 540
|||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 272 aaagataccgacttgtgtctatgtttttagaatttacatggtagtttttgtttttaagtc 213
Query: 541 agggtttcatag 552
||||||||||||
Sbjct: 212 agggtttcatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 950
Length adjustment: 10
Effective length of query: 542
Effective length of database: 940
Effective search space: 509480
Effective search space used: 509480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
